Mesitornis unicolor (brown roatelo): 104534224
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Entry
104534224 CDS
T08455
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03015
mRNA surveillance pathway
mui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104534224 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
104534224 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104534224 (PABPC1L)
03041 Spliceosome [BR:
mui03041
]
104534224 (PABPC1L)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104534224 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
104534224 (PABPC1L)
Spliceosome [BR:
mui03041
]
Complex C
Other components
Complex C specific factors
104534224 (PABPC1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_10
RRM_occluded
RBD_DEAH11
RRM_5
RRM_ACIN1
DUF8400
RRM_3
ATP-grasp_2
DUF6262
Motif
Other DBs
NCBI-GeneID:
104534224
NCBI-ProteinID:
XP_010192121
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPVDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGSILSCKVVCDENGSRGYGFVHFETHEAANVAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGVDVDDDRLREMFSKYGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRILYVGRAQKRLERQSELKRKFEQIRQARVSRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQAPPGYFLPPIPQPQTQATF
YGPSPAVPVRPATRWSAPPSRPPPYPAATPVLRSAAPPRRLLSNISTMRQASTQVPRVPP
QAQRVVNIGTQTVSGRMPSSPTLPRGAPHYKYSSAVRNVQPMGSSSHTAVVGELAVHVHG
QEPLTASMLAAAPPQEQKQMIGEHLYPLIHVMHPSLAGKITGMLLEMDNSELLLLLESPD
SLHAKIEEAVAVLQAHQVTETSHKSSAMAFLQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctagcggccctggctatccgttagcctccctctatgtgggggacctccaccca
gatgtgaccgaagccatgctctacgagaagttctcgcctgctgggcccatcatgtccatc
cgagtctgtcgggatgtcgccacgcgccggtctctgggttatgcctacataaacttccag
cagcctgtggatgctgagcgagccctggacaccatgaacttcgaagtgatcaaaggccgt
cccatccgcatcatgtggtcacagcgggaccccgggctcaggaagtcaggggttggaaac
gtcttcatcaagaacctggacgactccattgataataaagccttgtatgacactttctct
gccttcggaagcatcctgtcctgcaaggtggtttgtgatgaaaatggatcccgtggctat
ggctttgttcactttgagactcatgaggcagcgaatgtggccatcgagaccatgaatggg
atgttgctcaatgaccggaaggtgtttgttggccattttaaatcccgcaaagagcgcgag
gcagagtttggggctagggcgatggagttcaccaatgtctacatcaaaaactttggggtt
gacgtggatgatgacagactgcgggaaatgttctccaagtatggaaagactctaagtgtc
aaagtcatgatggacaacactggccgctcgaagggctttgggttcgtcaactttgagaag
catgaagaagcccagaaggcggtggctgacatgaatgggaaggagatcaatgggcgcata
ttgtacgtgggccgagcccagaagcggctggagcgccagagcgagctgaagcggaaattt
gagcagatcaggcaggcgcgggtgagcaggtaccagggcgtcaacctgtatgtgaagaac
ctggatgatgggatagatgatgagaggctgaggaaggagttctctccgtatggcaccatc
accagtgccaaggtgatgacagagggtggccatagcaaaggatttgggtttgtatgtttt
tcctccccagaagaggctaccaaggctgtgacagaaatgaacgggcggatcgtcagcacc
aagcctctctatgttgcgcttgcacaaaggaaagaggagcggaaagcaatcctcaccaac
cagtacatgcagagattagctaccatgagggctctgcccggccctctcctggggtccttc
caggcccctccggggtatttcctaccccctatccctcagccacaaacccaagctaccttt
tacggccccagcccagctgtcccagtccgtcctgccactcgctggagtgcgccacccagc
cggcctcccccgtatcctgcagctactcccgtgctgaggtctgctgcgcccccccggcgc
ctgctgtccaacatcagcaccatgagacaggcctccacacaggtgccccgtgtgcccccc
caggcccagagagtggtcaacattgggacacagactgtcagcggccggatgccctcgtcg
cccactctgccgcggggtgccccccactacaagtactcctcggccgtcaggaacgtgcag
ccaatgggatccagtagtcacacagctgtggtgggagaacttgctgtgcatgtccatgga
caggagccgctgacagcatccatgctcgcagcagcccctcctcaggagcagaagcaaatg
ataggtgagcacctctaccctctgatccacgtgatgcatccctcactggctggcaagatc
actgggatgctgctggagatggacaactccgagctgctgctgctcctggagtcccccgac
tccctccatgccaagatcgaggaagcggtcgctgttctccaggcacaccaggtgaccgag
acatcccacaagagcagcgccatggcgttcctgcagtga
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integrated database retrieval system
