Mesitornis unicolor (brown roatelo): 104535954
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Entry
104535954 CDS
T08455
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104535954 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mui03400
]
104535954 (LIG3)
Enzymes [BR:
mui01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104535954 (LIG3)
DNA repair and recombination proteins [BR:
mui03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104535954 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
aRib
DUF3802
Motif
Other DBs
NCBI-GeneID:
104535954
NCBI-ProteinID:
XP_010178755
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MPTGSRTLSQTARALGRATGLFSLNTQVCLPRPCLCCIGIPAASPSSWYQQLLRSISLRS
EARNWVGGAGAFHFSLFLHAWLRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKVVPNPFTESGGDMKEWYHVKCMFEKLEKARATTKKIEDITDLEGWEELQDAEKEL
INKHISEANSKAGSTPKKKVIVQAKLTATGQITTKDPLALITPSPKKFSGFTAKPKNSED
VSANSSHTSSLSAKKCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLKKGSAGDG
FRGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETIRLFF
EQSKSCPPAAKSHLTIQEVDEFLIQLSKLTKEDDQQSVLQHITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLQNQQEAEKVPGLKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFNYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFRDANVCLFVFDCI
YFNDTNLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDIKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPKWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
NVVAGEEDESTAGSSGENDGNSRSSTPHSTIKTPPNKSPAKAQKPEEKSKAVVGSPQKSE
EKRGEKRKASEMDDDEKKPLLDIFTGVKLYLSPSVKDFDKIRRYFIAYDGDLVSEFDTAS
ATHVIGDVDDNPGAKRVSPNWIWACIRKRRLVAPC
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaggcagcaggacgttgtcacagactgcccgggcgctcggcagggccacagga
ctcttctccctcaatacacaggtctgcttgccaagaccttgcctttgctgcattggtatc
cctgcagccagccccagttcctggtaccagcagctattaagaagcatatctctccgctcc
gaagccaggaactgggttggtggtgctggggctttccatttctccctgtttttacacgct
tggcttcgccaagcctgcacagctgcagaggacatggcagagcagagatactgtgtagac
tatgccaagcgtggcacggcaggctgcaaaaagtgcaaggagaagattgtgaaaggaatg
gtgcgtattggaaaggttgttcctaatcctttcacggagtctggtggggacatgaaggag
tggtaccatgtgaagtgcatgtttgagaagctagagaaggctcgggccaccaccaagaaa
atcgaagacatcacagacttggaagggtgggaagagttacaagatgcggagaaagaatta
atcaacaagcacatctcagaagctaactccaaggctgggagtacaccgaagaaaaaagtg
atagtccaagctaagctcactgccacaggacaaataactacaaaagatccattggctctc
atcactccatcaccaaagaagttctctggctttacagccaagccaaagaattcagaagat
gtctctgcaaactcttcccacacgtccagcctatctgcaaaaaagtgtgacccgaagcac
aaagactgcttgctgcgggagttcaggaagctctgtgccatggttgctgaaaagcctagc
tacaatgtgaaaacgcagatcatccaggattttctgaagaagggatctgcaggagatggc
tttcgtggtgacgtgtacctcaccattaagctgctgttaccaggcgtcattaaaattgtt
tacaacttgaacgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatggtccgggacctggaacagggagatgtttctgagacgattcgcctcttcttt
gaacagagcaagtcttgtcctccagcagccaaaagccacctgaccatccaagaggtagat
gaattcctaatccagctgtcaaagctgacaaaggaggatgaccagcaaagcgtgctgcaa
cacatcactcgcagatgtacgggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgcaggagcaaagcatgtgttggatgctttggatcccaatgcctat
gaggcgttcaaagcatcgcgcaacctccaggatgtggtggagcgagtcctgcagaaccag
caggaggccgagaaggtgccggggctgaagcgaactctcagtgtgcaggcctctctgatg
acccccgttcagcccatgctggctgaggcctgcaagtcaatcgagtacgccatgaagaag
tgcccaaatggcatgtatgcagagatcaaatacgatggtgagcgggtgcaggtccataaa
aatggagatcatttcaactacttcagcagaagcctcaaacctgtcctcccacacaaagta
gcccatttcaaggacttcatcccccaggctttccctggtggacaaagtatgatcctggat
tcagaagttcttctgattgacaacaaaactggcaagccgcttccttttgggactcttggt
gtgcacaagaaagctgctttccgagatgccaatgtttgcttgtttgtgtttgactgcatc
tacttcaacgacaccaacctgatggacaggcctctgtgtgaacgtcggaagtttcttcac
gataacatggttgaaatccccaaccggatcctcttctcagagatgaagcacgtcacaaaa
gcttcagatctggcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatataaaggggaattatgaaccaggaaaacggcactggttgaaagtgaaaaaa
gactacctgaatgagggtgcaatggctgacacagcagacctggtggtgctgggagctttc
tatggacaaggcagtaaaggtgggatgatgtccatcttcctcatgggctgctatgaccct
aagagcgagaagtggtgcactgtgaccaagtgttccggtggccacgacgatgccaccttg
gcacgtctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattcca
aagtggctaaaaattaacaaaatctactacccggacttcattgtcccggatcccaagaaa
gccccggtgtgggagatcacaggggctgaattctctaaagctgaggcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagacgacaaagactggaagaca
gccaccaacctgcagcagctcaaggagctgtaccagctctccaaggagaaggctgatttc
aatgttgttgctggggaggaagatgagtccacggctggcagcagtggagagaatgacgga
aattccaggtcttccacgccacacagcaccattaaaactcccccaaacaagtcccctgca
aaagcccagaagcctgaagagaagagcaaagcagttgttggatcccctcaaaaatcagag
gagaaacgaggggagaagagaaaagcatctgagatggatgatgatgaaaaaaagccactg
ctggacatattcactggagtgaagctgtacctgtcgccctccgtgaaggactttgacaaa
atccggcggtacttcatagcgtatgacggggatcttgtgtcagagtttgacacggcctca
gcaacgcatgttatcggggacgttgatgacaatcctggtgctaagcgtgtgtctcccaac
tggatctgggcctgcatccggaaacggagactggtagccccctgctag
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