KEGG   Mesitornis unicolor (brown roatelo): 104538058
Entry
104538058         CDS       T08455                                 
Symbol
CIRH1A
Name
(RefSeq) cirhin
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
mui  Mesitornis unicolor (brown roatelo)
Pathway
mui03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mui00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104538058 (CIRH1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mui03009]
    104538058 (CIRH1A)
Ribosome biogenesis [BR:mui03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104538058 (CIRH1A)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Ge1_WD40 Beta-prop_TEP1_2nd Beta-prop_ACSF4 Frtz Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st RNA_pol_Rpb1_1 VID27
Other DBs
NCBI-GeneID: 104538058
NCBI-ProteinID: XP_010179418
LinkDB
Position
Unknown
AA seq 633 aa
VIPGHDARSVESLCWAAGERLFGAGLSGEIIEYDLARLCAARPVDGCGGPIWSMAANSSG
TQLAIGCEDGSVKLFQVVLGGIQFERNLDRRKGRILCLSWHPSDTHIAAGSIDILRVFDV
SSGQTVQRIMVNYQVQKVMRECVVWSIAFLSSGTVVTSDSFGRVQFWDWERGTLEESHTV
STSPVLSLAVSEKEDSIIVGTSTGATYQFQLLPVKVGSLEKRWVRTKPFQHHTHDVRAVA
HSPTALISGGLDAQLVIRPLMEKMQKKGYDAVLRKFTFPHRRLVSCARKARLLLFQFSQH
LELWRLGSTEGTGKDGEVLPLCRMPEHLLQLKSKGPEHIYCSCVSPCGSWVAYSTASRFL
LYRVQHEGNSISVRKVPKVPKLLLPAFQLQFSSDSGKLFVASARGSVHVLQLLEPGGCKH
LHTLRPPSGTPEAVYLLAPSTDGRWVAAVSGDWVIHVYNLKCSKHHCTVPSYSCAVSAIA
IHPVTNNLVIAYADQQLFEFSIPEKQYTAWSRTVQNCGLHKGWLERDSPITHIAFNPKNP
SHILLHDLYMFCILDKSLPLPDNNTLLMNQSTLKQLPETARQRQLHAFKICKKFQPLLFA
DLLDGNRLVMVERPIMDVKTQLPLPVQQKKFGT
NT seq 1902 nt   +upstreamnt  +downstreamnt
gtcatccccgggcacgatgcccgctcagtggagtccctgtgctgggcggccggcgagcgg
ctcttcggggccggtctgagcggggaaatcatcgagtacgacctggcccggctctgtgct
gcccgccccgtggacggctgtggggggcccatctggagcatggcggccaacagcagcggc
acgcagctggcgattggctgcgaggacggctccgttaaactcttccaagttgtgctgggg
gggatccagttcgagcggaacctggacaggcggaaaggccgcatcctgtgcctctcctgg
cacccctcggacacgcacatcgcggccggctccatcgacatcctccgcgtgttcgacgtc
tcctcaggccaaacggtgcagcggatcatggtgaactaccaggtgcagaaggtgatgcgg
gagtgcgttgtgtggagcatcgccttcctctccagcggcaccgtcgtcacctcggactcc
ttcgggagggtgcagttctgggactgggagcgagggacgctggaggagtcccacaccgtc
agcacctcgccggttctctcactggctgtgtctgagaaggaggacagcatcattgtgggc
acctcgacgggggccacctaccagttccagctgctgccggtgaaggtgggcagcctggag
aagcgctgggtgcggacgaagcccttccagcaccacactcatgacgtgcgagccgtggca
cacagcccgacggcgctcatctccgggggcctggacgcccagctggtgatccgcccactg
atggagaagatgcagaagaagggctatgatgctgtgctccgcaaattcaccttccctcac
cgccgccttgtctcctgcgccaggaaagcccgcctgctcctcttccagttctcccagcac
ctcgagctctggagactgggctccaccgaagggaccggaaaggacggcgaggtccttccc
ctgtgccgcatgcccgagcacctcctgcagctcaagagcaagggtccagagcacatctac
tgcagctgcgtctcgccctgtggcagctgggttgcctactccaccgcctcccgcttcctc
ctctaccgggtacaacacgagggcaacagcatcagcgtcaggaaggtccccaaagtgccc
aagctgctgctcccagccttccagctccaattctcctccgactccggcaaactcttcgtc
gcctctgctcgaggctccgtccacgtcctccagctgctggagccggggggctgcaagcac
ctgcacacattacggccaccctcagggacccctgaggccgtttacctgctggcaccgagc
actgacgggcgctgggtggctgcggttagcggggactgggtaatccacgtctacaacctg
aagtgctccaagcatcactgcacggtgcccagctacagctgcgcggtgagcgccatcgcc
atccaccccgtcaccaacaacctggttattgcctacgccgaccagcagctatttgagttc
agcatccctgagaagcagtacacggcctggagccgcacggtgcagaactgcgggctgcac
aagggctggctggagagagactctcccatcacccacatcgccttcaaccccaagaacccc
tcgcacatcctcctccacgacctctacatgttctgcatcctcgacaaatccctgcccctg
ccagacaacaacaccctcctgatgaaccagagcaccctgaagcagctcccagagacggcc
aggcagcggcagctccacgccttcaagatctgcaagaagttccagcccctgctctttgcg
gatctgctggacgggaaccgcctggtgatggtggagcggcccatcatggatgtcaagacc
cagctccccctccccgtccaacagaagaaatttggcacctga

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