Mesitornis unicolor (brown roatelo): 104538058
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Entry
104538058 CDS
T08455
Symbol
CIRH1A
Name
(RefSeq) cirhin
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104538058 (CIRH1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mui03009
]
104538058 (CIRH1A)
Ribosome biogenesis [BR:
mui03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104538058 (CIRH1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML
Beta-prop_WDR3_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Ge1_WD40
Beta-prop_TEP1_2nd
Beta-prop_ACSF4
Frtz
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
RNA_pol_Rpb1_1
VID27
Motif
Other DBs
NCBI-GeneID:
104538058
NCBI-ProteinID:
XP_010179418
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
VIPGHDARSVESLCWAAGERLFGAGLSGEIIEYDLARLCAARPVDGCGGPIWSMAANSSG
TQLAIGCEDGSVKLFQVVLGGIQFERNLDRRKGRILCLSWHPSDTHIAAGSIDILRVFDV
SSGQTVQRIMVNYQVQKVMRECVVWSIAFLSSGTVVTSDSFGRVQFWDWERGTLEESHTV
STSPVLSLAVSEKEDSIIVGTSTGATYQFQLLPVKVGSLEKRWVRTKPFQHHTHDVRAVA
HSPTALISGGLDAQLVIRPLMEKMQKKGYDAVLRKFTFPHRRLVSCARKARLLLFQFSQH
LELWRLGSTEGTGKDGEVLPLCRMPEHLLQLKSKGPEHIYCSCVSPCGSWVAYSTASRFL
LYRVQHEGNSISVRKVPKVPKLLLPAFQLQFSSDSGKLFVASARGSVHVLQLLEPGGCKH
LHTLRPPSGTPEAVYLLAPSTDGRWVAAVSGDWVIHVYNLKCSKHHCTVPSYSCAVSAIA
IHPVTNNLVIAYADQQLFEFSIPEKQYTAWSRTVQNCGLHKGWLERDSPITHIAFNPKNP
SHILLHDLYMFCILDKSLPLPDNNTLLMNQSTLKQLPETARQRQLHAFKICKKFQPLLFA
DLLDGNRLVMVERPIMDVKTQLPLPVQQKKFGT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtcatccccgggcacgatgcccgctcagtggagtccctgtgctgggcggccggcgagcgg
ctcttcggggccggtctgagcggggaaatcatcgagtacgacctggcccggctctgtgct
gcccgccccgtggacggctgtggggggcccatctggagcatggcggccaacagcagcggc
acgcagctggcgattggctgcgaggacggctccgttaaactcttccaagttgtgctgggg
gggatccagttcgagcggaacctggacaggcggaaaggccgcatcctgtgcctctcctgg
cacccctcggacacgcacatcgcggccggctccatcgacatcctccgcgtgttcgacgtc
tcctcaggccaaacggtgcagcggatcatggtgaactaccaggtgcagaaggtgatgcgg
gagtgcgttgtgtggagcatcgccttcctctccagcggcaccgtcgtcacctcggactcc
ttcgggagggtgcagttctgggactgggagcgagggacgctggaggagtcccacaccgtc
agcacctcgccggttctctcactggctgtgtctgagaaggaggacagcatcattgtgggc
acctcgacgggggccacctaccagttccagctgctgccggtgaaggtgggcagcctggag
aagcgctgggtgcggacgaagcccttccagcaccacactcatgacgtgcgagccgtggca
cacagcccgacggcgctcatctccgggggcctggacgcccagctggtgatccgcccactg
atggagaagatgcagaagaagggctatgatgctgtgctccgcaaattcaccttccctcac
cgccgccttgtctcctgcgccaggaaagcccgcctgctcctcttccagttctcccagcac
ctcgagctctggagactgggctccaccgaagggaccggaaaggacggcgaggtccttccc
ctgtgccgcatgcccgagcacctcctgcagctcaagagcaagggtccagagcacatctac
tgcagctgcgtctcgccctgtggcagctgggttgcctactccaccgcctcccgcttcctc
ctctaccgggtacaacacgagggcaacagcatcagcgtcaggaaggtccccaaagtgccc
aagctgctgctcccagccttccagctccaattctcctccgactccggcaaactcttcgtc
gcctctgctcgaggctccgtccacgtcctccagctgctggagccggggggctgcaagcac
ctgcacacattacggccaccctcagggacccctgaggccgtttacctgctggcaccgagc
actgacgggcgctgggtggctgcggttagcggggactgggtaatccacgtctacaacctg
aagtgctccaagcatcactgcacggtgcccagctacagctgcgcggtgagcgccatcgcc
atccaccccgtcaccaacaacctggttattgcctacgccgaccagcagctatttgagttc
agcatccctgagaagcagtacacggcctggagccgcacggtgcagaactgcgggctgcac
aagggctggctggagagagactctcccatcacccacatcgccttcaaccccaagaacccc
tcgcacatcctcctccacgacctctacatgttctgcatcctcgacaaatccctgcccctg
ccagacaacaacaccctcctgatgaaccagagcaccctgaagcagctcccagagacggcc
aggcagcggcagctccacgccttcaagatctgcaagaagttccagcccctgctctttgcg
gatctgctggacgggaaccgcctggtgatggtggagcggcccatcatggatgtcaagacc
cagctccccctccccgtccaacagaagaaatttggcacctga
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