Mesitornis unicolor (brown roatelo): 104538556
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Entry
104538556 CDS
T08455
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104538556 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mui03041
]
104538556 (PRPF6)
Spliceosome [BR:
mui03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104538556 (PRPF6)
Complex C
U5 SnRNP specific factors
104538556 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
T7SS_EccA1_N
ARM_TT21_C
TPR_21
ARM_TT21_5th
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
104538556
NCBI-ProteinID:
XP_010180096
UniProt:
A0A091R1K0
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
ATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQTADDDDEDLNDTNYDEFNGY
AGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSD
LKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQSGENHTSVDPRQ
TQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSG
QTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGK
LQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELET
DIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE
TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINRE
QWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYA
YALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDV
PAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKL
EWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIP
LWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNIANTLMAKAL
QECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWF
HRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCDVSKDIENWQK
KIGEILVLVAAKLKNTF
NT seq
2755 nt
NT seq
+upstream
nt +downstream
nt
agccacaggtttcaccacccgctccgatatcggccctgcccgcgatgccaacgaccccgt
ggacgaccgacatgcaccgcccgggaagagaactgttggggatcaaatgaaaaagaacca
gacagctgatgatgatgacgaagatttgaacgacaccaattacgatgagttcaatgggta
tgctggcagcctgttctcaagcggtccctatgaaaaagatgatgaggaagccgatgctat
ttatgcagctttggataagaggatggacgaacgcagaaaagaaagaagggaacaacgaga
aaaagaggaaatagaaaaataccgtatggaacgacccaaaattcagcagcagttctcgga
cttgaaacggaagctcgcagaagtcacagaagaagagtggctgagtattccagaagttgg
tgatgccaggaacaagcgtcagaggaatcctcgttatgagaagctgactcctgtacctga
tagcttctttgcgaagcatttgcagtcgggggagaatcacacttctgtggacccacgcca
gacgcaatttggtggattgaatactccatatccagggggtttgaatactccgtacccagg
aggaatgacaccaggtttaatgacacctgggaccggtgaattggacatgaggaagattgg
ccaagccaggaacaccttgatggatatgagactaagccaggtgtcggactctgtgagtgg
ccagactgtagtggaccccaaaggatatttgacagacttgaattcgatgattcccacaca
tggaggagatatcaatgatatcaagaaagcccgtttgctcctgaaatctgtacgagagac
taatcctcatcatccaccagcctggatagcatcagcccgactggaggaagtcactggcaa
actccaagtggctcgaaacctcatcatgaaaggaacggagatgtgccccaagagtgaaga
tgtttggttagaagctgctcggcttcagcctggggatacagccaaggctgtcgtggccca
agctgtccgccaccttccacagtctgtccgcatctatataagagcagcagagctggagac
agatatccgtgcaaagaaacgtgtccttaggaaagcccttgaacatgttccaaattcggt
gcgtttgtggaaagcagccgtggagttagaagaacctgaggatgccaggatcatgctgag
tcgggctgtggagtgctgtcccactagcgttgaactgtggcttgcgctggcaaggctgga
gacatatgagaacgctcgtaaagtccttaacaaagcccgtgagaatattccaacagatcg
tcacatctggattactgctgccaaactggaagaagccaatggaaacacccagatggtgga
gaaaatcattgacagagccatcacatcccttagggctaacggtgtggaaatcaacagaga
gcaatggatacaggatgctgaggagtgcgacaaagctggaagcgtggccacgtgccaggc
aatcatgcgagctgtgattggcattggcattgaggaggaagaccggaaacatacgtggat
ggaagacgcagacagttgtgttgctcataatgctctggagtgtgcccgagcaatttatgc
ttatgccttgcaagttttcccgagcaagaagagcgtgtggctgcgagcagcgtactttga
aaagaaccacggaacgagagaatccttggaggctcttttgcagagagctgttgctcactg
tcccaaagcagaagtgctgtggctcatgggagccaaatcaaagtggctggcaggagatgt
gccagcagccagaagcattttggccttggctttccaggccaaccccaacagcgaggagat
ctggctggctgccgtgaagctcgagtcagaaaacaatgagtatgaaagagcaaggaggct
gctggcaaaagctcgcagcagtgcccccacggccagggtcttcatgaagtctgtgaagtt
agagtgggtgcttgggaacattgctgcggcccaggagctttgtgaggaagccctgaagca
ctatgaggacttccccaaactgtggatgatgaaaggacaaatcgaggaacagaaggagct
ggtagagaaagcacgggaggcttataatcaagggttgaaaaagtgtccccattcgatacc
actgtggcttttgctgtccaggctggaggagaaagttgggcagttgactcgagcaagagc
catcttggaaaagtctcgcctaaagaatccgaagaatccagatctctggttagagtctgt
gcgattagagtacagagctgggctgaagaatattgcaaatactctgatggccaaggcact
gcaagaatgccccaattcaggaatcctgtggtcagaggcaatcttccttgaagcacgacc
gcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgacccacatgtcct
gctggctgtggccaagctgttctggagcgagcgtaaaataaccaaggcccgagaatggtt
ccaccgaacagtgaagatcgactcggacctgggggatgcctgggctttcttttacaaatt
tgagctccagcatggcacagaggaacaacaagaagaggtgaggaagcgctgtgagaatgc
tgaaccacgccacggagagctctggtgtgatgtctccaaggacatagagaattggcagaa
aaagatcggagagattctcgtgcttgtggcagccaagcttaaaaacaccttctag
DBGET
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