Mesitornis unicolor (brown roatelo): 104539886
Help
Entry
104539886 CDS
T08455
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104539886 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mui03400
]
104539886 (MSH6)
DNA repair and recombination proteins [BR:
mui03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104539886 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PWWP
Motif
Other DBs
NCBI-GeneID:
104539886
NCBI-ProteinID:
XP_010181850
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MEGYPWWPCLIYNHPTEKTIVRGKGKSTRIHVQFFDDSPTRGWVSIKYLRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAVSKDKTKRLELAVCNEPSDAEEEEEEEEEQMSGSASG
NSDDCNSEEDVKSNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEEASS
GVDENESTDTETDVESVAESPIKVPTKRKRRERTKPAKRSNLENERSETPKRAATVSSEA
KSKLTSFAAPESFESQANACSGGISGFAVWEHEKLDWLQEGKKKDAHRRRQSDPEYDPCT
LYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGA
WAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRCKSMAHPTKFDKVVRREICR
IITKGTQTYSILDSDPSENHNKYLLCVKEKEDSSAQRIYGVCFVDTSVGKFYVGQFSDDR
HCSRFRTLVAHYTPVQVLYEKGNLSLDTQKILKGSLVSCIQEGLTSGSQFWNAPKTLKVL
LEEGYFKEKQNSENGCFLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLID
QELLSLANFEEYIPVDIDLAKATSSSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGT
LLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPHKMSEVSEHLKKLPD
LERLLSKIHSIGSPLKSQNHPDSRAIFYEEVKYSKKKIADFLSALEGFKVMNEIVDVMEE
IASDFKSKVLKQLVTRKAGNPDGHFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDY
DKALQDIKAVEEDLHKYLDKQRKLLGYKSVLYWGTGKNRYQMEIPESVISRNLPEEYELK
STRKGYKRYWTKEIERMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVL
DVLMSLANYSQDGDGQLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIG
SRDEDSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRL
GASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAE
KIKCRTLFSTHYHSLVEDYSHNVAVQLGHMACMVENESEDPSQETITFLYKFIGGACPKS
YGFNAARLANIPEEVIQKGHRKAKEFEKTTISLRIFRYLCLVVDGAACDANAVQKLTGML
NQL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatttacaaccatccgactgaaaaaacaata
gtcagaggaaaagggaaatccactcgtatccatgtacagttttttgatgacagccctaca
agaggctgggtcagtattaaatatctgaggccatataaaggctcatcagatggggagaca
ctgaagggaggtatgttttatagtacaaagcctgaaatcaaaagagcaatggtgctagcg
gatgatgcagtgagtaaagataaaactaagcggcttgaactggcagtatgcaatgaacct
tcagatgcagaggaggaggaagaggaagaagaagagcagatgagtggaagtgcatcaggc
aacagtgatgactgtaacagtgaggaggatgtgaagagtaacaagcgagtaatgagcagg
gaaagtgccataaaagccaaaagaagaagagtgttggattctgacagcgatcatgatggt
tctgacgtagagttcaagcctgatgtgaaagaagcggcaagcagtgaggaagccagtagt
ggggtggatgaaaacgagtctactgacacagagacagacgtagagagtgttgcagaaagt
cccataaaagtccccactaaacgaaagagaagagagagaaccaagcctgctaagaggagt
aacttagagaatgaacgttctgaaacgcccaaaagagcagcaacagtttcttcagaagcc
aagtctaagctgacgtcatttgcagcacctgaaagttttgaatctcaagcaaatgcttgc
agcggaggcatcagtggcttcgcagtatgggaacatgaaaagcttgattggctgcaggaa
gggaaaaagaaagatgcgcacaggcgacggcagagtgaccccgagtatgacccctgtact
ctgtacgtacctgaggactatctcaacaagtgtacaccaggaatgcggaggtggtggcag
ctgaaaagtcaaaattttgatgctgtgatttgctacaaagttggaaaattttatgagttg
tatcatatggatgcagtcattggtgtaaatgagttgggcctgatctttatgaaaggcgct
tgggcccattccggtttcccagaaactgcctttggcagattctctgatgttctggtgcag
aaaggctacaaggtagcccgtgttgaacaaacagaaactcccgaaatgatggaaacacgc
tgcaagtcaatggcccatccaacaaaatttgacaaggttgtacgccgagaaatatgcaga
atcatcaccaaaggcactcagacttacagcattctggatagtgatccctctgagaaccat
aacaaataccttctgtgtgtcaaggaaaaagaagactcctctgcacagcgcatttatggg
gtctgctttgttgacacatcagtggggaagttttatgttggccagttctcagatgaccgg
cactgttcgaggtttaggactttagtagcacattacactcctgtgcaggtactgtatgag
aaggggaacctctctctggacacacagaagatactgaagggctcacttgtttcttgcatt
caggaagggctgacctctggttcccagttctggaacgcacctaaaacactaaaagtcctc
cttgaagaaggatatttcaaggagaaacagaactctgaaaacggatgctttctgccctct
gtaatcaaatctctgacttcagagagtgactcgctgggattaactcctggtgaaaacagt
gaattagcattgtcagctctcgggggatgtgtcttctatctcaaaaaatgtctgattgat
caggagttgttatcgctggcaaactttgaggagtacatccctgtggatattgatcttgca
aaagctacgagttcaagtagtttctttgccaaaactgaccagcggatggtgctggatgga
gtcaccctgatgaacttggaagtcctgcagaatggcaccaatggaaccacggaaggtact
ttgttggaaaggattgattcgtgttgtacaccatttgggaagcgactcctgaaacagtgg
ctctgcgctccactttgtaatcctaaatccatcaatgaccgtttagatgctgttgaggac
cttctggcagtgccacataaaatgtctgaagttagtgagcacctgaagaaacttcctgac
ctcgaaaggctgctcagcaaaattcacagtattggatccccacttaaaagtcagaaccat
cctgacagcagggccatcttttatgaagaagtcaaatacagcaaaaaaaagattgcagat
tttttgtctgcactggaggggtttaaagtaatgaacgaaattgttgatgtcatggaagaa
attgccagtgacttcaaatctaaagtccttaagcagctggtcacccgcaaagccggaaat
ccagatggccacttcccagacttgagtgcagagctgaaaaggtgggatactgcttttgat
cataaccaggcgcggaagacaggagtgattactccaaaggcgggctttgaccccgattat
gataaagcactacaggatattaaagctgtggaggaagatcttcataagtacctggataag
caacgcaaactgcttgggtacaaatctgtgctgtactgggggacaggcaaaaaccgctac
caaatggaaataccagaaagtgtaatatcacgtaatttgcctgaggaatatgagttgaag
tccaccaggaagggatataagcgttactggaccaaggagattgagaggatgctggctgca
atggttaatgctgaagagcgcagagatgcagcactcaaagactgcatgaggcgcttgttt
tacaactttgataagaacagcaaggactggcagacagctgtggaatgcattgctgtgcta
gatgtcttgatgtcccttgctaactacagtcaagatggtgacggacagctgtgccgacct
gtaattctgctgcctgtggatagtgctcctcccttcctggaacttaaaaattcacgccat
ccgtgcattacaaaaactttctttggggatgatttcattcctaatgacatcgtgataggc
agcagagatgaagatagcagcagtgaagcttcttgtgtgttagtaacgggcccaaatatg
ggtggcaaatctacgctcatgagacaggctggtctcctggttataatggctcagctggga
tgctacgtacctgctgaagtctgcaggcttacaccaattgacagagtgtttacgaggctt
ggtgcctcagacagaattatgtcaggtgaaagtaccttctttgttgaattgagtgagact
tccagcattctgcagcatgcaacggagcattcccttgttcttgtggatgaactgggcaga
ggcacagctacttttgacggaacagctatcgcgagtgcagttgtgaaagaactggcagag
aagatcaagtgccggactctgttctccacgcactaccactcgctggtagaggactattca
cacaacgtggctgtgcagctcggacacatggcatgtatggttgaaaatgagagtgaagat
ccaagccaggaaacaattacgttcctgtataagttcattggaggagcttgtccaaagagc
tatggcttcaatgcagcaagacttgctaatattccagaggaagttattcagaaggggcac
agaaaagcaaaagagtttgaaaaaacaactatttcattgagaatatttaggtacctgtgc
ctggtggtggatggtgcagcatgtgatgcaaatgctgttcagaaacttactggtatgctc
aaccagctttga
DBGET
integrated database retrieval system
