Mesitornis unicolor (brown roatelo): 104539953
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Entry
104539953 CDS
T08455
Symbol
COL6A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui04510
Focal adhesion
mui04512
ECM-receptor interaction
mui04518
Integrin signaling
mui04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104539953 (COL6A6)
04518 Integrin signaling
104539953 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104539953 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104539953 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mui04147
]
104539953 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
mui00536
]
104539953 (COL6A6)
Exosome [BR:
mui04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104539953 (COL6A6)
Glycosaminoglycan binding proteins [BR:
mui00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104539953 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
104539953 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
vWA_SIBA-E
VWA_CoxE
DUF3663
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
104539953
NCBI-ProteinID:
XP_010181934
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MTPCTNQHRLWATQLESSFAEDMGVLMDRVEYESALVAKADYIVLLVESSVAMEPSSLPY
VKKFIIRMIDSLPIGPNQFRLALAQYSDELSTEFMLDTYRRKGPMVNHIRKEFILKGGSS
VQTGNALYQAYETFFKKSSDEKAKQQIIVILTSAPSEDDVQEAARSLQSLGVKIIAIGTK
EASYNELFEMATPPFHYKNPVIEELQKFSEYVPQIIDDITQYREAVKDDLXVCDGDLVAD
IVFIVDHGTSKSNFEELKKFLQNLASSFDVKEKCVRIGLVMYTDGQEVVSHLNTDTSKAE
ILEIIQDLSAGSGKANTGAAINVTRLKLFTESAGSRKKQGVEQIAVLITHRPSQDNVSDV
STLLRRGGVTAFAIGVEGASDQQLVQIASYPQEQYVTSLKVFSDLQRQNAIFRKKLLNQI
QNKLYVHPERNEILKTGCLDTEAADIYLLVDGSSSLNYLDFVDMKNFLKEMVRLFDIGIN
KTRFGLVQFSHFNELEFELNKYTSASDLIKGIENIRQIGGNTSTGAALDYMKLLFEKARR
QREVPVPGHLVVLTDGESQDSVKEPAIKLRQDKINIYAIGVRGANRTQLSEIAGEKSRVY
FVHNFDSLNNIKSEVVQEICTPEVCKEMKADIMFLVDSSQSIGNENFLKMKNFMRELVNR
TDVGADRVQIGVVQFSDKPKEEFKLNTYSTKREILSAIDRISPLQSSTLTGEALKFMLQY
FQASSGSRHAVKKVLILITDGESQDEVKAPATVLRNKGIIIYSVGVFNANKTQLEEISGK
REMVFYVENFDILDTIKKSLIFYICSTPADDECKRVERLDIVFVMDSSGSINPSQYKSMK
DFMIALVKKSDVGPDQVQFGALKYSDKPVVLFYLNKYTTELKITEAIQRDDLLGGSTYTA
EALVHSEIFFTEEHGSRKSKGVPQLLIVITDGESHDRDYLDDVAQRLRNKGIIILAIGVE
GAKQDELLTMAGSEEKCFYVNTFEGLENLTANITSDICNISVPNCPKKADVIFLMDGSRN
IDEENFRIMMDFVRSVINPAVIVQNTKIGLALYGGVYKEEFSLGIFPNRSELEFKIQSIK
QIKGHQSNIENALEKVKLNFQAEKGSRIHENIQQILLVIIAGRTTSRAARAAESLRRKGV
DIYAIGVGNVDQSQLTQITGSSSRKYVVDDFSKLKTIKKRLVDVICEDNNRKVSCFVDIS
VGFDISSQREGHHFFHGQAKLEKHFPEILQALLSLRDVSCNLGSKAQSSVAVQVKNTVNP
ISTKFYIDSESVLSNLLDAVIKSPSQLNVEFLQSLWETFQDKDETRQKVLLVFSDGADDD
LEALEQKSEELKKKGLDGLITIALEGASNFQNLQSIEFGKGFEYGTHLDIGMTDIASRLS
KFLNNIAERTCCCLSCKCTGEKGEIGARGPQGIKGPNGVKGNLGYPGDEGDPGPRGPLGL
RGRQGNVGCQGNRGLKGFRGFFGKKGDHGEDGSDGIRGEEGSPGVPGKKGEKGDIGYPGS
PGPRGPPGDRGQKGFQGDPGNPGLNSAITGARGFAGEEGEEGERGQKGSRGFSGSVGNPG
NRGQPGQYGLQGKQGYKGPQGQKGTNGQKGEKGRPGRKGPPGQPGDPGPKGERGPRGLHG
RQGEDGAFGYGLPGEKGVKGNKGFPGDFGLKGEVGDKGDTGERGLKGYRGRMGISGHPGL
EGSPGDRGSPGRRPCELIDYVRKHSACWDGKLACPVYPTELVFALDTSRTLTSETFEVMR
EMMIAIVKNARIRESNCPVGARVAVVSYNSVTHHLIHFSEFHNKNKLLNALKNISYQRSS
SERDTGGAMRFIAKNVFKRTLQGPNVRKIAVIFSHGPAADAFSVKQAVLEMSALEVIPVV
IAFEDTPHISQAFMMDDSGLFQVLNVLAGQFNDTLQKFQLCTLCYDKCKPDAFCERPRHR
LPRAYVDAAFILDSSQKMSGAEFEQVKDFMSKAVTAFNISLDPKTSVVGDRIAVVSHALP
DFKGTGRRPVKKEFDFVTYRSKDRIRRYIKESLQQLNGEAAVGYAIQWTIANIFSGAPNP
RLRKIIIIISAGKTSQWDKGVLKKISLQAKCQGYALLAISLGKSYDRNELEGLASTPLEQ
HLVQLGRIHKPELDYVIRFLKPFIHFLRSENSYPPEELKAKCSSLQFQSQRPV
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatgcaccaaccagcacaggctgtgggccacccagctggaaagcagctttgca
gaagacatgggtgtcctgatggacagagtcgaatatgagtcagcccttgttgcaaaggct
gattatattgttctcttagttgagagctctgtcgctatggaaccttcatctcttccctat
gtgaaaaaatttatcatccgtatgattgacagcctgccaatagggcctaaccagtttcgg
ctggcacttgctcagtacagtgatgaattgtccactgaatttatgctggacacttacaga
agaaaaggtcctatggtgaatcatatcaggaaagaatttatacttaaaggtgggagttca
gtgcaaactggaaatgctctctatcaggcttatgaaacctttttcaaaaagtcatcagat
gaaaaagcaaagcaacaaatcattgtgattttgacgtcagcaccctcagaagatgatgtc
caagaagctgccagaagcttgcaaagtcttggagtaaagataatagctatagggacaaaa
gaagcttcatataatgaactttttgagatggctaccccaccatttcattacaaaaatccg
gtgatagaagagctgcagaaattctcagaatatgtgccacagatcattgatgatattacc
caatacagagaagcagtaaaggatgatctttaagtatgtgatggagacttggttgctgac
attgtgtttatagttgatcatggtacttcaaagtcaaactttgaagaattaaaaaaattc
ctgcaaaacctagcatcttcatttgacgtgaaggagaaatgtgtaagaattggcctggta
atgtacactgatggacaagaagtggtgtctcacctgaacacagacacaagcaaagctgaa
attctggagataatacaggacctttctgctgggtcaggaaaagccaacactggtgcagct
attaatgtcacaaggctaaaactctttactgaaagtgctgggagcagaaagaagcaaggt
gtagagcaaatagctgttctgattacccacagaccctctcaagacaacgtgagtgatgtt
tctactcttctgcggagaggtggtgtgacagcatttgccataggtgttgaaggtgcttct
gatcaacagctggtccagatagcctcttatcctcaagagcagtatgttaccagtctcaag
gtgttttctgacctgcaaaggcaaaatgcaatttttcgaaagaaactcttgaatcaaata
caaaacaagctctatgtccaccctgaaagaaatgagattctcaaaacaggatgcctggac
acagaagcagctgatatttatttgcttgttgatggttcatcaagccttaactacttggat
tttgtggatatgaagaattttttgaaggaaatggttagactgtttgacataggaataaat
aaaactcgatttggacttgtgcagttctcacatttcaatgaactggagtttgaacttaat
aaatacacttcagcaagtgatttgataaaagggattgaaaatattcggcaaataggtgga
aataccagtacaggggcagctctagattacatgaaactgttgtttgaaaaggccaggagg
caacgagaagttccagtgcctggccatctggttgtgctcacagatggagaatcacaggac
agcgtgaaggaaccagccataaaactcaggcaagacaagattaacatttatgccattggt
gtaaggggagctaatagaactcagctttctgagattgcaggagagaaatccagagtgtac
tttgtacataattttgactcgctgaacaacattaaaagtgaagttgtccaagagatctgt
accccagaagtctgcaaagaaatgaaagctgatatcatgtttctagtggacagttctcaa
agtattggaaatgagaactttctgaaaatgaaaaacttcatgagagagctggtgaacaga
acagatgttggtgcagacagagtgcagattggtgttgtccaattcagtgacaaaccaaag
gaagagttcaagctcaacacctactccaccaaaagagagatcctcagtgctattgatagg
atatctccccttcaatcctccacactgacaggagaagcactgaagttcatgcttcaatac
tttcaagccagtagtggctcacgtcacgcggttaaaaaagttctcatcctgatcacagat
ggagagtcgcaagatgaagttaaagcccctgccacagtgctccgaaataaaggcattatt
atctactctgttggagtttttaatgcaaacaagactcagcttgaagagattagtggaaag
cgtgagatggtattctatgttgaaaattttgatattctagacacaattaaaaaaagcctc
attttttacatttgcagtactcctgctgatgatgaatgcaaaagagtggaacgtttagac
attgtgtttgttatggacagctctggaagcataaacccctcacagtacaagtccatgaaa
gacttcatgattgccctggtgaaaaagtctgatgtcggcccggatcaagttcagtttgga
gcactaaaatattctgataaaccagtagtgctcttttatctcaataagtatactacagaa
ctgaagattactgaggctatccagagagatgacctgctaggaggaagtacttacacagca
gaagcgctggtccattcagaaatattcttcactgaagagcatggcagccgcaagagcaaa
ggagttccccagctgctgatagtgataactgatggagaatcccatgacagagactacctg
gatgacgtggcccagagattaaggaacaaaggaattatcatccttgcaattggagtagaa
ggtgcaaaacaagatgaacttctgacaatggctggatcagaggagaaatgtttctatgtg
aatacctttgaaggacttgagaacttaactgcaaatataacaagtgatatatgtaatatt
tcagtaccgaactgtccaaagaaagcagatgttatttttctaatggacggttccagaaac
atagatgaagaaaacttcaggataatgatggactttgtgagaagtgtaatcaatccagct
gttattgtgcaaaataccaaaattggccttgcactgtatggtggtgtctataaagaagag
ttcagcctaggcattttccctaacagatcagaactagaatttaaaattcaaagcatcaaa
caaattaaaggacaccaaagtaatattgaaaatgcacttgagaaagtgaaactcaatttc
caagcagaaaagggtagcagaatacatgaaaatatccaacagattttactggtaatcatt
gctggacgaacaaccagtagagctgcaagagcagcagaaagcctgaggagaaaaggtgtg
gatatatatgccataggtgtgggaaatgttgatcagtcccagctaacacagataactgga
tcatcaagtaggaaatatgttgttgatgatttttccaagttgaagaccataaaaaaaagg
ctggttgatgttatttgcgaggataataatagaaaagtatcttgttttgtggatatcagt
gtgggatttgacatttcatcacagagggaaggccaccacttttttcatggacaggccaaa
ctggaaaaacatttccctgagattttgcaagccctcctgtctctaagggacgtgagctgc
aatcttgggtccaaggcacagagcagtgtggctgttcaagtgaagaatactgttaaccca
atatctacaaagttctacattgacagtgaatctgtcctgagtaacctgttagatgctgtg
atcaagagcccatcccaacttaatgttgaattcttgcagtcactctgggaaacgtttcag
gacaaggatgagacccgacaaaaggtattacttgtgttttcagatggtgcagatgatgac
ttagaagcacttgaacaaaaatctgaagaacttaaaaagaaaggtttggatggtcttata
actattgctctggaaggagcctccaattttcaaaacctccaatccattgagtttggaaaa
ggatttgaatacggaactcacttagatattggcatgacagacatcgctagcaggctatcc
aagttcttgaataatatcgctgagaggacctgctgctgcttgtcttgcaaatgtactggg
gaaaaaggcgaaatcggagctaggggaccacaaggaataaagggaccaaatggtgttaaa
ggcaacctgggatatcctggagatgaaggagatccgggcccaagaggaccacttggacta
cgaggaagacaaggcaatgtggggtgtcagggcaacagaggtttaaaggggtttcgagga
ttttttgggaaaaagggtgatcatggggaagatgggagtgatggaatcagaggagaagag
gggtctcctggtgttcctggaaagaaaggagaaaagggtgatattggatatccgggaagt
ccagggccaagaggaccccctggtgatcgtggccagaagggctttcaaggagatcctggt
aaccctggactaaacagtgcaataacaggagcaagaggctttgcaggagaagagggggaa
gagggtgagagaggacaaaaaggctcacgtggcttctcaggaagtgtaggcaacccgggc
aatcgtggacagcctggtcagtatggcttgcaaggaaaacaaggatacaaaggacctcag
ggacaaaaaggcactaatggtcaaaaaggagagaaagggagaccaggacgtaagggtcct
ccaggacaacctggtgatccaggaccaaaaggagaaagaggtccacgtggtttgcatgga
aggcagggggaagatggtgcttttggatatggtctacctggagaaaaaggagtaaaggga
aataaaggatttcctggagattttggactaaagggtgaagttggggacaagggagataca
ggggaacgtggactaaaaggatatagaggcagaatgggtatttcaggacatcctggtctg
gaaggcagtccaggagacaggggatctccaggacgcaggccatgtgaactcattgactat
gtccgcaaacacagtgcttgttgggatggtaaactggcatgcccagtatatccaacagaa
ctggtgtttgccttggatacctctaggacactcacttctgagacatttgaagtaatgcga
gagatgatgatagcgatagtgaagaatgccagaatcagagagagcaactgcccagtggga
gccagagttgctgttgtttcctacaactcggttacccaccacctgatccacttctcagag
tttcacaacaagaataagctactgaatgcactaaaaaatatttcttaccaaagatcctcc
agtgaacgagacactggaggtgcaatgagattcattgccaagaacgttttcaagagaact
ctacaaggtcccaatgtgagaaaaatagctgtgattttcagccacggaccagctgcagat
gcattttctgttaaacaagctgtcctggagatgagtgcattagaagtcattccagtggtt
attgcttttgaagacaccccccatatctcccaagctttcatgatggatgactctggtttg
tttcaggtgctaaatgttcttgctggacagtttaatgacacattacaaaaatttcagcta
tgcactttgtgctatgataaatgtaagccagatgctttttgtgaacgtcccaggcaccgt
ttacccagagcgtatgtggatgctgccttcattctggatagttcacagaaaatgagtggt
gctgaatttgagcaagtgaaagacttcatgagcaaagcagtcactgcattcaacatttcc
ttggatccaaaaacatctgttgtaggggatagaatagctgtggtgagccatgcactacca
gatttcaaaggcacaggaaggaggccagtgaagaaagaattcgactttgttacctaccgc
agtaaagaccgaataagaagatatattaaagaatctcttcaacagctgaatggagaggct
gctgtcggctatgccatacaatggacaattgctaacattttctcaggggctcctaatcca
aggctacgcaaaattatcatcattatatctgctggaaaaacgagtcaatgggacaaagga
gtgctaaaaaaaatttccctgcaagctaagtgccaaggctatgcactgctagcaatttca
ctaggaaagtcctatgacagaaatgaactggaagggcttgcaagcactcctctggaacag
catttggttcagcttggcagaatccacaagcctgagcttgactatgtaataaggtttctg
aagccattcatacatttcctcagaagtgagaacagctatccaccagaagagctcaaggca
aagtgtagcagcctccaatttcagagccaaagacctgtgtaa
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integrated database retrieval system
