Mesitornis unicolor (brown roatelo): 104541879
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Entry
104541879 CDS
T08455
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104541879 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mui03032
]
104541879 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
mui03400
]
104541879 (TOPBP1)
DNA replication proteins [BR:
mui03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104541879 (TOPBP1)
DNA repair and recombination proteins [BR:
mui03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104541879 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104541879
NCBI-ProteinID:
XP_010184334
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MEGCKEPFFVKFIKSSGNSEYFFKALESIKEFQSEEHLQILAEETALSIKENDKSLYICD
PFRGGVFNNLKKLGCRIVGPQVVLYCMQSQRCVPRAERPVYNMTMADVTVSCTSLDKDVR
EEVHKYVQMMGGRVCRDLSVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SIMRYTDVNMEDHACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIKKGFCQDETIYKIEAGSRLSNVPSTSTPTDQ
ASKPNNHALSDVSHISSINLSAVNETTSSSAMSSRLDPLPDELDNLDISSFEVPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHV
VTAKWLLDSFNKGYLHPVEQYIPLNYQLLENPILEQPGMKSILPKNNLSKKEAVNVTKHQ
KAAEDDFLSQYALNNDSTLDEVEKLTSRTFSDDTHLTVQGENRSSVCNGSLGESSAMAEG
GLFVRKTFLLLGFGEEDESYLTDIIKENAGKILPLQSRTIADYAVVPLLGCTVKLTVGDV
VTDTWLRTCVEQELLLDPQANPLFTPVLVMEGAAPLEDCVLSFSQFTGAERDSLVHLAGL
LGARVQDVFVRKANAKKGMVASTHLVVREPEGSKYEAAKKWNLPAVTVAWLLQSARTGKR
ADESKFLVENAEAEDKESSVTQLCKTPATVKSPDSEQPAYHLEAGKKPAVTPLDINRFQS
KAFQAVISHHIGKTAPLTQGGPPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALSALETP
GGPHQKTRKLSTPLSEVIGRNLKLALANSTRPTVALTASPQLTDAQPETEEEPKPLADVV
VYVSKKLSKKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIV
SEHWLLESAQEYKRLPESLFPHTYNPKMSLDISTVQDVSLSSSRKLPLTGKPAEENEIIP
VDEDDPEDDVTTDQIKETDTTEEEQTVTSESKGVLTQALEMRESFQRQLQEIMSATSLVR
PQGQRGSLSRNTSDGSPTTPDSTRSMRNGRSRVLEALRQSRQALTDINTEPSQSEQIIWD
DPTAREERARLVSNFQWPNSPSQYTEQGQSNSSKNMDESAFKGSLADAEMAAIAVPDAAV
GDLIEGLKYPVCRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVAEDEKIDEEP
EKHRKFQLSSLNPQERFDYSHLIEELGGTVLEKQCFDPSCTHIVVGHPLRNEKFLASMAA
GKWVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHRG
RQETGVVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHVFADFSK
LKPDDTRVNVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAKSYLQNNTELGTGL
SQKRKALSEMSRVKRSRIH
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttgtaaggagcctttttttgtgaaattcataaagtcttctgggaactcggag
tatttttttaaagctcttgagtcgataaaagaatttcagtcagaagaacatctccagatc
cttgcagaagaaacagcactcagtataaaagaaaatgataaatcactttacatttgtgat
ccttttagaggcggcgttttcaataatctcaaaaagcttggttgtagaattgttggacca
caggtagtcctgtactgcatgcagtcccagcgatgtgtcccaagagcagagcgtcctgtg
tacaacatgaccatggccgatgtaacagtatcctgtaccagccttgataaggatgttagg
gaagaagttcataaatatgtgcagatgatgggtggacgtgtgtgcagagacctcagtgtg
tcagtaactcatcttatagctggagaagttggcagcaagaaatacttagtagctgcttct
ctgaaaaagcctattttgcttccctcttgggttaagacactgtgggataagtctcagcaa
agcataatgagatacactgatgttaacatggaagaccacgcttgtccggtgttccttggc
tgtacaatttgtgtaaccggcttaagtagctcggacaggaaagaagtccagcgcctcact
gccgaacacggtggacaatatacggggcagctcaagatgaatgaatgtactcacctcatc
gttcaagagccaaaaggtcagaagtatgaatgtgccaaaaaatggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcattaagaaaggcttctgtcaggatgagacaatatat
aaaatagaggctggatcaagactgagcaatgtacccagtacgtcaacacctacagatcaa
gccagcaagcccaataatcatgccctttcggacgtcagccatatttccagtatcaatttg
agtgctgttaacgaaaccacaagtagctctgctatgagcagcagactggatccacttcct
gatgagctggataacttggatataagttcttttgaagtccctgaagatttgttagatggg
tgtcgaatctatctgtgtggcttcagtggcaggaagttggacaagatgagaaggcttatt
aattgtggtggtggtgttcgatttaatcaacttaatgaagatgttactcatgtcatcttg
ggagaaaataatgatgaactgaaacactttttggacaagacagctcacaggcctcatgta
gtgacagcaaaatggttgctggactcatttaataaaggttatctacatccagtggaacag
tatatccctctaaactaccagctgttagagaacccaattttggagcaacctggaatgaag
tcaattcttcccaaaaataatctttcgaagaaagaggctgtaaacgttacaaagcaccag
aaagctgctgaagatgactttctatctcaatatgcccttaataacgattctacattagat
gaagttgaaaaactaacatccagaaccttcagtgatgatactcacttgacagttcaagga
gagaatcggtcctctgtctgtaatggttctttaggagagtcttctgcaatggctgaaggg
ggcttatttgtcagaaagacgtttcttcttttgggttttggtgaagaggatgagtcctac
cttacagatattataaaggagaatgctgggaaaattctgccgctgcaaagcagaaccatt
gcagactatgctgtggtgcctttattggggtgcacagtgaagctgactgttggtgatgtt
gtcacagatacgtggctgagaacatgtgtggaacaggagctccttttagatccccaggcc
aatccacttttcacaccagtcctggtaatggaaggagctgcccctctggaagattgtgtt
ctttcttttagccagttcactggtgcagagagagactccttggttcatcttgcaggacta
ctaggagccagagtccaagatgtctttgtgcggaaagccaatgccaaaaagggaatggtt
gccagtactcatcttgtggtcagagaaccagaaggttccaagtacgaagctgcaaagaag
tggaatttgcctgcagtcactgtagcttggcttttgcagtctgcaaggacagggaagaga
gcagatgaaagcaagttcttggttgaaaatgcagaggctgaagataaggagagttcagtt
actcagctttgcaagacaccagcaactgttaaatctcctgattcagaacaacctgcttat
catcttgaagctggaaaaaaaccagctgtgacccctctggatatcaacaggttccagagt
aaagctttccaagctgtaatctctcatcatattgggaagacagcccctcttacacaagga
ggaccgccacagaaagaaccatctttacatcttgatacaccatcaaaattcctttctaaa
gacaagttattcaagccttcttttgatgtaaaggatgctctgtcagctttggaaactcca
ggaggtcctcatcaaaagaccaggaaactaagcacacctctctctgaagtcattggcaga
aacttgaaattggcactggcaaacagcacaaggcctacagtcgctcttactgccagccct
cagttgaccgatgcacagccagaaacggaagaagagcccaagccgctggctgatgttgtt
gtatacgttagcaaaaaacttagtaagaagcagagtgaactgaatgctgtagcagcttct
cttggggcagactacagatggtgctttgatgaaacagtaacacacttcatctacaaggga
ggacaaaatgacaacaataaggagtacaaatctgttaaagaacggggtatacatattgtt
tcagaacactggcttttagagagtgctcaagaatataaacggcttcctgaatctctcttt
ccccacacttacaatcccaaaatgagcctggacatcagcacagtgcaagatgtcagcctc
tcctcctccaggaaacttccattaactggaaaaccagcagaggaaaatgagattattcca
gtggacgaagatgaccctgaagatgatgtaactactgaccaaataaaggaaactgacact
acagaagaagaacagactgtaacaagtgaatccaaaggagttttaacccaagcactagaa
atgagggagagcttccaaagacagctgcaggagatcatgtctgccacatcgctagtgaga
ccacaggggcaaagaggatccctttcaaggaacacttctgatggttctccaaccactcct
gatagcacgcggtccatgcgaaatggccgcagtagggtcttggaagctctaaggcagtcc
cgtcaggcgctcacagatataaatacagagccatcccagagtgagcagatcatctgggat
gaccctactgcgagggaggagagagcaagacttgtcagcaactttcagtggccaaatagt
ccttcccagtacactgaacaaggtcagagcaactccagtaagaacatggatgagtctgcc
ttcaaaggatctttagctgatgcagagatggctgctatagctgtgcctgatgctgcagtt
ggagatttgattgaaggtctaaagtatcctgtgtgtagagatccagaaacaccgattaaa
gatcacttgatccccactccgcaggcccccagcattgctttcccactggctaaccctcct
gtggcaccacagcccaaagaaaaggctgttgcagaagatgagaagattgatgaagaacca
gaaaaacaccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactcc
catctgattgaggaattaggtggaacagtacttgagaaacagtgctttgatccgagttgc
acacacattgttgtgggacatcctcttcgaaatgaaaaattcttggcttcgatggcagct
ggaaagtgggtgcttcaccgttcctacctggaggcatgcagaggagctggctgctttgtt
caggaagaagattacgagtggggaagtaattccatactcaatgttttgcctggaatcaat
gtaaaccagaagaaactagcacttgcagccatgaggtggaggaaaaaaattcatagagga
aggcaagaaactggtgttgttgagggagctttcagtggctggaaagtgatcttgaatgtt
gaccaaaccaaagaagcgggattcaggcgccttcttcagtcaggaggagcaaaggtattt
tctggccattctgtgtctctctttaaagaagcaactcatgtctttgctgacttcagtaag
ctgaagccagatgacaccagggttaacgtagcagaggcggcagcccaaggagtgaactgc
ctgaaaccggagtacatcgccgactacctcatccaggatccacctcccccaatggagtcc
tactgcctgccggaagctaaatcgtaccttcagaataacacggaacttggaactggatta
tcccagaaaagaaaagcactgagtgaaatgagcagagtcaagcggtccagaatacactga
DBGET
integrated database retrieval system
