Mesitornis unicolor (brown roatelo): 104542038
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Entry
104542038 CDS
T08455
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104542038 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104542038 (NUP54)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104542038 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104542038
NCBI-ProteinID:
XP_010184529
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MPVLSVVMEKYFSFSFLXPTFYLELMLPCSFSASRLSGFGGLETTNSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFNFGNTLASAGAFGGFGTTTSSTGPAFSFSAPTNTGTGL
FGATQNKGFGFGTSFGTGTGTGLGTGLGTGLGFGGFGTQQQQTRAQTTLGSGLFSQPAQA
PAQSNQLINTASALSAPILLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPF
CRFKAVGYSLMHNHKDEDGFVALVFNRKEIDIRSQQQQLVESLHKILGGNQTLTVNVEGV
RMMPDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMTRTELSP
AQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPLPMVGFKELLRRLKVQDQMTKQHQTR
LDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQL
RVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVQAEERYYIDADLLREIKQHLKQQ
QEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttgtctgtggtaatggaaaaatattttagcttttctttcctgnaccctacc
ttttacttagaactaatgttaccttgctctttttctgcttcccgcttgtcaggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttctactacctcaactccg
ccattcaattttggtaacactctggcaagtgcaggtgcgtttgggggatttgggacaact
accagcagtacgggaccagcatttagtttttctgctcccaccaatacaggcacaggactg
tttggtgctacccagaacaaaggctttggatttggtactagttttggcacaggaactgga
actggtttgggtactgggttgggaactgggttaggctttggaggcttcggtacccagcag
caacagaccagagctcagacaacactaggaagcggtttgttcagccagcctgctcaggca
ccagcccagtcgaaccagctcatcaatacagccagtgccctctcggctccaatactctta
ggagatgaaagagatgctattttggcaaagtggaaccagcttcaggccttctggggaacg
ggcaaagggtacttcaacaacaacatcgctccagtggagttcacgcaggaaaaccctttt
tgcaggtttaaggctgtcggttacagtttaatgcacaaccacaaagatgaagatggtttc
gtggccttggtctttaacagaaaagaaatagatattcgaagtcagcagcagcagcttgta
gaatcactacacaaaattctgggaggaaaccagaccctcactgtcaacgtagaaggtgtt
agaatgatgccagatgaccagacagaagtgatcatttacgttgtcgagcgctcgcctaac
ggcacttcaagaagagttcccgcaacgaccctctatgcccactttgaacaagccaacata
aaatcgtcactgcagcagctgggggtcagcctctccatgaccagaacagagctttccccg
gcacaagtcaagcagctcctgcagaaccctcctgctggtgtcgatcctattatatgggaa
caagccaaagttgataatcctgatcctgacaagcttattcctttgccaatggtgggtttc
aaggaactattgagaagattgaaggtccaagatcagatgaccaaacagcatcaaactcga
ttagatataatatcagaagatatcagcgagctgcagaaaaaccaaacaacaactatggca
aaaattgcacagtacaaaaggaaactgatggcgctttctcacagaacattacaggtgtta
ataaagcaggagatccaaaggaaaagtggctacgctattcaagcggatgaagagcagctt
cgtgtacagttagatacaattcagtgtgaacttaatgcaccaacgcagttcaagggcaga
ctgaatgagctcatgtcccagatcaggatgcaaaaccactttggagcagtgcaggctgaa
gagcgctattacatagatgcagacctcttacgggaaatcaagcaacatctgaagcagcag
caagaaggcctgagtcacctaatcagcattataaaggatgacttggaggatatcaaactt
atagaacacggcctgaacgagagcatccccatcagaggaggagtcttcagttga
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