Mesitornis unicolor (brown roatelo): 104542276
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Entry
104542276 CDS
T08455
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mui04147
]
104542276 (COL18A1)
00535 Proteoglycans [BR:
mui00535
]
104542276 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
mui00536
]
104542276 (COL18A1)
Exosome [BR:
mui04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104542276 (COL18A1)
Proteoglycans [BR:
mui00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104542276 (COL18A1)
Glycosaminoglycan binding proteins [BR:
mui00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104542276 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
104542276
NCBI-ProteinID:
XP_010184831
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MAALCVVSFQGVIADLKLQGDPQAAEHQCEEEEDDTEEVSGDFGSGAEGGHQPSEKVVGV
PGLVDVVPVTSPPVAAGGGLKIFXLAERTRVEEALQVSAGATGLKGEKGEKGERGLKGDT
GTGSIMGTGSVKGEKGEKGEVGVKGSAGFGYPGSKGQKGEPGAPSPAGTLSRHADGLVVE
QVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKGEKGDPGVGPRG
PPGPPGPPGPPGPSSKHDKLTFIDMEGSGFGGDLETLRGPRGPPGPPGPPGVPGLPGEPG
RFGMNHTDLPGPPGLPGRDGSPGPPGPAGPQGPPGKDGAAGQPGPKGEQGDVGDLGLPGA
PGPKGSKGETGQAGAPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPGYEAGFGDMEGSGLP
FTAVSPGPRGPEGPQGVPGLPGLKGEVGSPGQPGLPGPKGDAGMPGVDGRPGLEGFPGPQ
GPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVIAVSSEDKSLVALPGPEGRQGHAGF
PGPVGPKGDRGSPGPQGSLGLKGEKGEPGVIISPDGTVVTAKVKGEKGEPGLRGPVGPSG
PQGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPADVSSVLGLRGPPGSPGPPGPPGPPGSV
VYDSSNAFSDSGHPVLPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLSHFYAIPQGDKG
EAGPKGEKGEPGSTPLYGPSVSGLPGPPGPQGYPGLPGPKGDTIVGPPGPPGPQGPPGIG
YEGRQGPPGPPGPPGPPSFPGPHRQAVSIPGPPGPPGPPGPPGTSGMSLGLRALPTYQAM
LGAAHELPEGNLVFLTDRQELYVRLRGGFRRVLLEEHTLMPSSALVSPLSPIHPSLPIPQ
HRLPEQPLLHHQHELLSPPPTARPWRGDEVVANQHRLPEQPLLHHQHELLNSYYIHRRRG
IRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFNNWEA
LFTGSGAPLRAGAHILSFDGRDVLRDAGCSGCQHTFIVLCIENSFMTAAKK
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctctgcgtggtttccttccagggggtgattgctgatttgaagctgcaaggc
gacccacaagcggccgagcaccagtgcgaggaggaggaggatgacactgaggaggtctct
ggtgattttggcagtggggcagaaggtggacaccagccctcagagaaagttgtgggtgtc
ccagggctggtggatgtcgtcccagtcacctctcccccagtggcagcgggcggtgggctg
aagatttttnntttagccgagaggaccagagtggaggaggcactgcaggtctctgcggga
gccaccggcctcaaaggtgaaaagggagagaaaggtgagcgtggcctcaaaggggacaca
ggaaccggcagcatcatggggactggcagtgtcaagggtgaaaagggagagaaaggagaa
gtgggtgttaagggcagtgcaggatttggctaccctggctccaagggccagaaaggggag
ccgggcgcccctagccccgccgggaccctctcgcggcatgctgacggcttggtggtggag
caggtcactgggccaccggggccgccggggaaggacggagcccctggcagggatggcgag
cctggcgatcccggtgaggatggcaaacccggcgatatggggccccaggggttccccggg
acgccaggggagcctgggctgaagggggagaagggtgatccaggcgtggggccaagggga
ccccctggaccacccggtcccccaggaccaccgggaccctcatccaaacatgacaaactg
accttcatcgacatggagggctccggattcggcggtgacctggagaccctgcggggtcca
cgagggccacctggtcccccaggcccacccggcgtgccaggtttgccaggggagccagga
cggtttggaatgaaccacacagacctgccaggaccaccagggctgccaggcagggatggg
agccctgggcctccagggccagcgggtcctcagggtcctcctggaaaagatggggcagct
gggcagccggggcccaaaggagagcagggtgatgtgggtgacctcggcctccctggtgca
ccgggacccaagggcagcaagggagaaacaggacaagcaggagccccaggtgaaatgggt
ttagctggccttcccggacccatcggacctcgagggcagccagggccccccggtccccca
ggaccgccggggccaggctacgaggctggatttggtgacatggagggctcgggactgcca
ttcactgccgtctctccaggaccacgtggacctgaaggaccacagggagtgccaggactg
ccggggctgaagggggaggttggcagccctgggcagcctggtttgccaggaccaaaggga
gatgctggcatgcctggtgtggatggccgccctggcctggagggcttccctggaccgcag
gggcccaaaggtgacagaggcagtcccggcgagaagggtgagcgaggccaagacggtgtg
gggctgcccggcccccctggtccacccggtccccctggacaggtcatagctgtctcaagt
gaagataagtctttggtggctttgcctggtccagagggcagacagggtcacgctggcttc
ccgggtccagtgggaccgaaaggagatcggggatcgcctggtccccagggctccctgggc
ttgaagggggaaaagggggagcccggtgtcatcatcagccctgatgggaccgtggtcacc
gcgaaggtgaaaggagaaaagggggagccggggctgcggggaccggtgggaccctcgggt
ccccagggacgagcggggatgaagggcgagatcggctttccgggcagacctggacgtcct
ggcatgaatgggctgaagggcgagaagggtgaccccgcggatgtcagcagtgtgctgggc
ttgcggggtcccccgggatctccaggtcccccaggcccccctgggccacctggcagcgta
gtctacgacagcagcaatgctttcagcgactccggccatcctgtgctgccagccttccct
ggtttccaccagtttccaggacaaaagggagagaaaggtgatgcaggagccccaggaccc
ccaggccacttcccctatgacctgagtcacttctatgccattccacagggcgacaagggg
gaggcaggtcccaagggtgaaaagggtgagcctggaagcaccccgctctacggtcccagt
gtctctgggctgccagggcctccagggccccagggttaccctgggttgccaggtcccaag
ggagacaccatcgttgggccaccagggcctcctggacctcagggtccacctggtattgga
tatgaggggcggcaaggtccccccggccctcccgggccccctggcccaccctccttccca
ggccctcacagacaagctgtcagcatccctggcccccctggaccaccaggaccccctgga
ccaccaggcaccagtgggatgtccttggggctgcgtgccctaccgacataccaggccatg
ctgggtgctgcacatgagctgcctgagggcaacctcgtcttcctgactgaccggcaagag
ctctatgtccgcctgcgcgggggcttccgccgggtactgctggaggagcacaccctgatg
cccagctcagctctggtgagtcccctatcccccatccatccatccctccccattccccag
caccgcctgcctgagcaacccctgctccaccaccaacatgagctcctcagccccccaccc
accgcccgaccctggcgcggggatgaggtggtggccaaccagcaccgcctgcctgagcaa
cccctgctccaccaccaacatgagctcctcaacagctactacatccaccgccggcgtggc
atccgtggcgccgatttccagtgcttccagcaagcccggcaggtcgggctggctggcacc
ttccgtgccttcctctcctcccgcttgcaggacctctacagcatcgtgcgcagggctgac
cgcgcagccgtgcccattgtcaacctccgggatgaagtgctcttcaataactgggaagcc
ctcttcacgggtagcggggccccactgcgagctggcgcccacatcctttccttcgatggc
cgggatgtcctgcgggatgcgggatgcagcggctgccagcacaccttcatcgtcctctgc
atcgagaacagcttcatgactgccgccaaaaagtga
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