Mesitornis unicolor (brown roatelo): 104542934
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Entry
104542934 CDS
T08455
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mui03021
]
104542934 (SCAF8)
03041 Spliceosome [BR:
mui03041
]
104542934 (SCAF8)
Transcription machinery [BR:
mui03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104542934 (SCAF8)
Spliceosome [BR:
mui03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104542934 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104542934
NCBI-ProteinID:
XP_010185705
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGISPPVFVT
PVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQL
QQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKL
MDRFDFGEESEQNEEPKKETPTSQMPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQ
QPQKTSPEENQEGNFGSEHSASPSQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDVAE
EEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSS
RSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQI
ESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWD
VDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAKENTQTTQSAAVDKS
TVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFN
PSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQETMKDVPFTSLVLPVG
TVNSNLATPTLSAGSVFNPLPISKPESDEKGSHLTDLQISSNENNRSVQSDVSSSSGLVG
GVQPPSVSSSSGLTGEGQPPSVSSSSGLSGGVQPPSVSSSSGLLGGVQPPTVSSSSGLVG
GVQLPAVSSSSSLAGGLQPTSVSSSSGLMAGVQPPNVSSSSGLLAGVHPPSISSSPGLLT
GMQPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNVSSSSGLMGVPPPNISSSSGLIAMQ
HPAGVQNMPHLNISSQRMPGXXXXXXXXXXXIRPGLMPHSPGPRFPLMQPGMPPQRSIPP
PAILDPSLHPPPRGPYPPGDIFSQTERPFGTPGRQNIDSISNPEKRLPLGGDNIQGXXXX
QEGDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGVGRPPVDGREHFVRPHVDMR
ENFGRPGIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRPVNY
RFDSRSGPNWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNW
IPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDPELYEKLTSSVEIN
KEKSDTEADIESEPVVESTETEGT
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcacgttgtccag
agcgttgagaaattcattcagaagtgcaaaccagaatacaaggtacctggtctgtatgtc
attgactccattgtgagacagtcccggcatcagtttggacaagaaaaggatgtatttgct
ccaagattcagcaataacatcatcagcactttccagaacttgtaccgttgtcctggagat
gacaagagtaaaattgttagagttctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctctcttggatatggcaggaggaatttctccccccgtttttgtgacc
cctgtcttgcccagcactacagctgctatgagcaacaatacaccaggaacacctgtgact
ccagttactccagccaatgtggtgcagagtttacctgatccttgggtatctcagattgcc
aatacagatacccttgctgctgttgcacagattttacagagtcctcaaggccaacagctt
cagcagttgatacagacactgcagatacagcagcagaaacctcagccttcactacttcaa
gccctagatgctggtcttgttgttcagttacaggccctcacagcacaacttacagctgca
gctgctgctgctaacacacttaatccactggaacagagtgtctcttttaataagaagctc
atggacaggtttgactttggggaagaatctgaacaaaatgaagaacctaaaaaggaaact
cccacttcccaaatgcctttagtaccagaatctgtgaacaactcactttttcatcaacta
gctgaacagctacagcaacaaaatttagaacatctcagacaacagcttctggagcagcag
cagcctcaaaagacaagccctgaggagaatcaagaaggaaattttggttcagagcactct
gcatcaccatcacaagggagcagtcaacagcagtttttagaagtggaaacaaatgtagat
gattcaatggatattcaacaacaggacatggatatagatgaaggacaggatgttgctgaa
gaagagattttcgagcaagaagaaaagaagtcagctgttcgttcaagatcaagaactcga
tcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatcacggtctggctctcgt
aagcgtaaacatagaaaacgttcacgctcgagatcgagagaaaggaagagaaaatcatct
cggtcgtattccagtgaaagaagggctagggaaagggaaaaagaacgtcagaaaaaggga
ttgcctcctatacggtcaaaaacactaagtgtttgcagtactactctttgggtaggtcaa
gtagacaagaaggctacgcagcaagatttaactaacttgtttgaagaatttggacaaata
gagtcaattaatatgattcccccaagaggttgtgcttatgtctgtatggttcatagacaa
gatgcatatcgtgctcttcagaaacttagttctgggtcctataagattggatctaaaatt
attaagattgcctgggctttgaataaaggtgtaaaaacagaatacaagcagttctgggat
gtggatctaggagtttcctatattccttgggagaaggtaaaactggatgatttggagggc
tttgctgaaggtggcatgattgaccaggaaacagtaaatacagaatgggagacagccaga
agctcagaagctgctaaagaaaatactcaaactacacagagtgctgcagttgataagagt
acagttattacaacacagacagaagcttacactcaaccagtcactatgctgcagattcca
gtagctccagctgtgcctgctgttagcttggttccacctgcgtttcctgtcacaatgtct
gtccctcctcctggttacagcgcaattcctcctccacccttcttgcgagcaagtttcaac
ccttcgcaaccacctccaggttatatgcctcccccggttccacctgtggtcccaccacct
gttgtcccgccacctgttgtcccaccagtcgttccaacacccttagtacagcctccatta
ccaattgcacaagagacgatgaaggatgttccttttactagccttgttctaccagttggc
acagttaatagcaatctagctactccaacgttatctgctggaagtgtttttaatcctctg
ccaatcagcaaaccagaatcggatgaaaaggggtcacatcttacagaccttcagatttct
tccaatgaaaacaatagatctgtgcaaagtgatgtctcgagtagctctggacttgttgga
ggagtgcagccacccagcgtctcaagcagttctgggcttactggagaagggcaaccgccc
agtgtctcaagtagctctggactttcaggaggagtacagccacccagtgtctcaagcagc
tctggacttctaggaggagtgcaaccgccaactgtttcaagcagttctggccttgtagga
ggagtgcagctccctgctgtctccagtagctcttctcttgctggcggacttcagccaacc
agcgtctcaagtagctctggacttatggctggagtgcaaccaccgaatgtctcaagtagc
tcagggcttctagctggagtgcacccacctagtatctcaagcagccctggccttctgaca
ggaatgcagccacccaatgtctcaagcagctcgggagttcttgcaggagtacagccaccg
agtgtctcgagcaactctgggcttctcataatgccaccacccaatgtttccagtagttct
ggacttatgggagtgccaccaccaaatatttcaagtagctctggacttatcgcaatgcag
catccagctggggttcaaaacatgcctcatttaaacattagtagtcaaaggatgccagga
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatccgtccaggcctaatgccccattcg
cctggaccaaggtttccattaatgcagcctggaatgccaccacagcgtagtattcctcct
ccagcaatccttgatccatctcttcacccaccacctcgaggtccttatcctccaggagat
atttttagtcaaacagaaagaccttttggaacaccaggaagacaaaatattgatagcatt
tctaatccagagaaaagactacctcttggaggcgataacattcagggaannnnnnnnnnn
caggaaggagacagagattatcgctttcctccagtggaaaaccgagataatcttaacaga
ccgtctccagtggatgtcagagattctgttggacgaccaccagttgatccaagagagggt
gtgggaaggcctccagtagatggaagagaacactttgtgagaccacatgtcgacatgaga
gaaaattttggaagaccaggtatagataaccttggtcgaagagagcattttggtttcaat
tcagacaagcactggggacaaagaggagattatgatgaaagggagcaccatgccttccct
atttatggtggccctaaaggcttccatgaagacagggagaggtttcggcctgtaaactat
aggtttgatagtagaagtggtcccaattggaatagaggatttgaacaagatgctcacaga
gattttgatgaccgcagaagaccctgggagaggcagagggatagggatgacagagatttt
aatttttgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaacaactgg
atcccacctccacatccacgggtttttgaatattttgatggggccacttcccaacgcaaa
gctgataatatgccccaggtaaatggtgaaaatacagagacagaaagtcagccaccaact
gcacaagtgcaggacgatccagaactttatgaaaaactgacatcttccgtcgagataaac
aaagagaagagtgacacagaagctgatatagaaagtgaaccagtggtagaaagcacagaa
actgaggggacataa
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