Mesitornis unicolor (brown roatelo): 104542998
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Entry
104542998 CDS
T08455
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mui03009
]
104542998 (DDX54)
Enzymes [BR:
mui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104542998 (DDX54)
Ribosome biogenesis [BR:
mui03009
]
Eukaryotic type
Pre-60S particles
Helicases
104542998 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
104542998
NCBI-ProteinID:
XP_010185789
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
PAILCGRVVAAMARTGSGKTACFLIPMFERLKAPSQAGVRALVLSPTRELALQTLKFTKE
LGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMKLKLHTVEYVVFDE
ADRLFEMGFAEQLQEIIARLPDNHQTVLFSATLPKLLVEFARAGLTEPMLIRLDVESKLS
EQLKLAFFHVRGDDKPAVLLHLLRSVVKPQDQTVVFVATKHHTEYLKELLTAQGIRCTHI
YSSLDQTARKINIAKFSQGKCPVLLVTDVAARGLDIPMLDNVINYSFPAKAKLFLHRVGR
VARAGRSGTAYSLVAPDEMPYVFDLHLFLGRPLVLAGAQELPVDAGGVLGRVPQSLVDDE
ECLLLTDHEGSLELRSLRRVADNAHKQYLRSRPGPSPESIKRAKDLDVSQLGMHPLFSSR
FEDTELERLKFVDSIKTYKSKATIFEINATSRTLASTVMRSKRRHDHALIENYQRGQQEK
RAAALKGQGLCPAPPAPEQGEEGEEEDLQDVFSTVVGQKRKRGRKGEDGARKKLQQPAQQ
DKDFYIPYRPKDFESERGLSVGGEGSPFEQQAAGAVLDLMGDENHNLNKSKQLLKWDRKK
KRFVGQTGQEDKKKVRTESGRYISSSYKNNLYEKWKQKYKVDERDEDEEGARSREQFRGK
HRRGGHTPGQPPARGKVRSELKNKQQILKQRKKAAKQRFLQSGGLKRLKARNRQRVQELR
QMAFGRRVGATKKGKLRKRV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
cctgccatcctgtgtggccgggtcgtggcggcgatggcacggacaggcagcgggaagacg
gcctgcttcctcatccccatgttcgagcggctgaaggcgcccagccaggccggggtgcgt
gcccttgttctctcgcccacccgtgagctggccctgcagaccctcaagttcaccaaggag
ctgggcaagttcacaggcttgaagacagctctgatcctgggaggagacaagatggaggac
cagtttgctgccctgcacgagaaccccgacataatcatcgccacccctgggcgcctggtg
cacgtggcagtggagatgaagctgaagctgcacaccgtggagtacgtggtgttcgacgag
gccgacaggctcttcgagatgggcttcgccgagcagctccaggagatcatcgcccggctc
ccagacaaccaccagaccgtcctcttctccgccacgctgcccaagctgctcgtcgagttt
gcccgggctggtctcaccgagcccatgctgatccgtctggatgtggagtccaagctcagc
gagcagctcaagctggcgttcttccacgtgcgcggggacgacaaaccggccgtgctgctg
catctgctgcgcagcgtggtgaagccccaggaccagacggtcgtcttcgtggccaccaag
caccacacggagtatctcaaggagctgctgacagcccagggcatccgctgcacgcacatc
tacagctcgctggaccagaccgcccgcaagatcaacatcgccaagttctcccagggcaag
tgcccggtgctgctggtcacggacgtggccgcccgtgggcttgacatccccatgctggac
aacgtcatcaactacagcttccctgccaaagccaagctgttcctgcaccgcgtcggtcgc
gtggcccgagctggccggagtggcactgcctactcgctggtggctcccgatgagatgccc
tacgtctttgacctccacctcttcctggggcgcccacttgtcctcgccggtgcccaggag
ctgcccgtggatgccggtggggtcctgggccgcgtcccccagagcctggtggatgacgag
gagtgcctgctgctgacggaccacgagggctcgctggagctgcgcagcctgcgccgcgtc
gccgacaacgcccacaagcagtacctgcggtcccggcccggcccctcgcccgagtccatc
aagagagcaaaggacctggacgtgtcccagctgggcatgcacccgctcttcagctctcgc
tttgaagacaccgagctggagaggctgaagttcgtggacagcattaaaacctacaagtcc
aaggcgaccatcttcgagatcaacgccacgtcccggacgctggccagcaccgtgatgcgg
tcgaagcggcgccacgaccatgccctcattgagaattaccagcgtgggcagcaggagaaa
cgggcagcggctctcaaagggcaggggctgtgcccagcaccccctgcgcctgagcaggga
gaagaaggagaggaggaagacctccaggatgtgttctccaccgtggtgggccagaagcga
aaacggggccgaaagggagaagatggtgcaaggaagaagctgcagcagccagcgcagcag
gacaaggacttctacatcccgtaccggcccaaggactttgagagcgagagggggctgagc
gtgggtggcgagggcagccccttcgagcagcaggcagccggagccgtcctggatctcatg
ggtgacgaaaaccacaacctcaacaagagcaagcagctgctgaagtgggaccgcaagaag
aagcgtttcgtggggcagacgggtcaggaggacaagaagaaggtgcggacagagagcggg
cgctacatcagcagctcctacaagaacaacctctacgagaaatggaagcagaaatacaag
gtcgacgagcgggatgaggatgaggaaggcgcccgaagcagggagcagttccgaggaaag
cacaggcgtggggggcacacgccagggcagccccctgcccgtggcaaggtgcgctcggag
ctgaagaacaagcagcagatcctgaagcagcgcaagaaggcggccaagcaacgcttcctg
cagagcggggggctgaagcgcctgaaggccaggaaccggcagcgggtgcaggagctgcgg
cagatggccttcgggcggagggtgggggccaccaagaagggcaagctgcggaaaagggtg
tag
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