Mesitornis unicolor (brown roatelo): 104543508
Help
Entry
104543508 CDS
T08455
Symbol
SETX
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mui03021
]
104543508 (SETX)
Enzymes [BR:
mui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104543508 (SETX)
5.6.2.5 RNA 5'-3' helicase
104543508 (SETX)
Transcription machinery [BR:
mui03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104543508 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
AAA_22
AAA_16
DUF4164
Motif
Other DBs
NCBI-GeneID:
104543508
NCBI-ProteinID:
XP_010186443
LinkDB
All DBs
Position
Unknown
AA seq
2776 aa
AA seq
DB search
MSTCRWCTPSGSDTTAFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREELPRLHE
VLWELETSRLVAHIEKSMRAEAGEDDELFIVDENGDTQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVCELCVEVLCRMEQSHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSSSMIEKGKLILLPSHLYDTTNYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEATDDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMITCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSHIGRDTRVHDSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKDILSETIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTQCTEKAPGHCARGSXQASNSVQHSCVQLIRSLLREGY
QIGQHALCKQYLDKINLLLRGNLSLGWQLNIQETQELQTCLKQVIRSIKYRAVNTSVPVG
NNTNSTTLPTISIKQEKSPCGGECKMSVHGRDDFSSPFALMSKGGGDEDCEEKPFSRRKS
AWEEECGDASKSSRFWTSAENLVMNIKKELDDLTTPEYVCPQNSLATKVCGKAQENRISD
PVAGKCDMGNQCFNPNARHSDFRRGGELENKCEAGPIAPMCLGAQTRIGSPEHVYSSDVK
ESCMSPSSPSKCKVDLHKVTNLKNKLRKMEWPAKLLQPVKPRGLKSCSKTARASKIAAEQ
PKLCTGYLCTSKDCLKHQRVNTVCENEKSVDTRSPRSCESTQEKSVNSAFQSRLDLAKRV
LPLDCSSFSKNEPGVQENDDGSILHLGFSDNSLKKVSSEEKSRSLLESVFEKDNDMQTSD
GEQPNLNDLVKYDCKGQISKTFCTDKTSANGHVPSSSENKKDISSAASRIRPLSVKCESS
DRLYKFSEYFKREEVSVVKKEEDFAKMTSEDSTLTDSQVDRELSKLSLAAYAKSVNFPFD
SSQEGSVHHNLCDIKRKVKGAVRSSSDGQSTTSLCDSDCRADKVIIISDSSDEEQGVAGK
EETKSNENVCPEGQSSTSSSISDSGIKMESKTPSSPLSLEDCESQYFEFETEVDVFSVWQ
DTQAYSMEATQEYKQDHVSTAVGSSNSDDLLDDHTNEWGYDVDCINYDTMEEAANLTEKQ
TDNISNQKEADNTKEVTNSTLQEFVSKGNTKDQLENFADKGTVAEDSTLVSKLTQPRAST
SNISLASKLALKKNSVSPQKSTAKSKVARTIQRSPKKPLVVKTAQNKKVLQSTSKNSLAG
RSLPAVVPPRKVRPCPAPASTVEKLGLKKAPRKAAELSQRSLDSVAQLRSYGKAAGRVGV
AQKQKSKLIAPQSLSVKHNKKFLACQDLQYLRQTRPKKSVRVTNLAGSSANRNKKVSEVD
AKSRKQKLESFELAAVEGFVENQRGKKREEMVCLSMDLSFSSTALVGGDKGEPSGKGCIV
QPECEKTTPKENGCKPNENSEDEDGDDLFLTQLDPVDMELCSQEESVQDTTIASKKTEEM
DTAESLQQNESSTTVKCKYKDCVEEVEKPGEYCSKHSATSSEADHLFAKPLPPPSKARRP
STTKIFSSASSSRNAAFSKDLENVKKLLPASKSKVNAAKPVVVRPPIAEAIPIGNKPCKL
PSFNNAPPPRITNNVLQPQNRQNNNASNICRRPDQGTRSSCLLGAQQRDHSIFINEVIKW
TYEMFANFIQFGPPCNLLQSIVASVPVQFQGYNDYFNTFFPLMMLNAFETLAQDWIENQR
VREKSYYFYLQSFSAELNTAVFTAHFQESDLAKQLHPKEDDLIFLVVQKKKDTFREGSEM
ENHIVQHVGLVTRFSHASGRSTRQKDQHTVCHLSVQTRGDLSFFINKQVKCVVVGSLVTT
RRAFKGLLLLSRSPLAKPIINPTYSDFCPRDLPVVSSAALDMKEYNEDQKRAIETAYAMV
KQHPGLPKICLIHGPPGTGKSKTIVGFLSRVLRENPRNEKATQNTNSKIKPNRFLVCAPS
NAAVDELMKKIIVAFKGKCQNRQEPLGNCGDIKLVRLGAEKTINSEVRGFSLDKQVEHRM
KRKPADSDQDIQKKKAALDQQLDMLSRQRAMHRCEKRESQMLDDEIGRLSKERQQLASQL
KEVRGHSQKVQADIILESDIICCTLSTSGGSLLESVFWRQGLDPFSCVIVDEAGQSCEVE
TLIPLVHRCSKLVLVGDPRQLPPTVKSIKAQEYGYDQSLMARLHRHLVEQVQKNVLRSLP
VVQLTVQYRMHPDICLFPSNYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERD
NDSFSNPQEVKLVMELIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRVFKNNSPGE
VDTVDAFQGREKDCIIVTCVRANSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLME
NKDWNELIQDAQKRGAIIKTSENSYRKDAARILKLKATVQPPAKAGSKKSQLQVCSSSSK
SGELANPREASSLQEPTDGTGHAAHAAPQGSRGPQQPQGAQAADSRRDSASVPVEAAALP
AHPEKPRDPRLASMASRTETKGKKQASKDSNCSGSTSQQGLDAARDQMSRTEASKKPQQM
MEQRDMPSVSPYAARREGDPRAPVLKSSSKAHSEGGRSTGSEWNKDCRDLTRRSSEASLE
NAESNNVKRRKTSRWL
NT seq
8331 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgcacaccaagtggctctgacaccaccgcgttcctgaagagc
tatgcttccaaacggttgtccccagaagatcttgaaggatccaatgatgatctttgttac
tgcctggagtgtgtggttgagtaccacaaagcaagggaagaattgccaaggttgcatgag
gtcttgtgggagctggaaacctcccgtcttgttgcccacattgagaaatctatgcgagct
gaagctggagaagatgatgagttgtttatagtggatgagaatggagacacacagctgtct
ggttatgtgggcccagattttgagaataacctgcgagtgccccttctagaaatactgaaa
tatccgtatctgctgctgcatgagaaagtctgtgagctgtgtgtagaagtgctctgtaga
atggaacaaagtcacagctcctttcaggtctttgaaaaatatccaggaatttatctcttt
ttggtgcacccaaatgaagtgattcgtcggtgggccatcctaacagcaagaaatttaggg
aaggttgacagggatgattactatgatttacaggaagtgctgacttgcttgttcaaagtt
attgagttggggctttttgagagtccagatatttacagctcttcaatgattgaaaagggt
aaacttatccttctaccatctcatttatatgatactaccaattacaagaactattggcta
gggatttgtatgttgctaacagtgctggaagaacaagctatggactccttgctactgggc
ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcaact
gatgattctactgaccccttctggccagcactgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtcagactacaacgatgacatgattacttgcagtcagattgtgtataat
tataacacagaaaagccacaaaaggataccggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctcatattggc
agagatacacgtgtccatgacagcacgtttctgtggttcatcccttttgttcagtcactt
atggatctcaaggacttgggtgtcgcgtatatagtggaggtcattcactacctctgctcg
gaaatcaaagatattcttagtgaaacaattcagcagtgtgacaaaatctcagaatttttt
cttctcatcttggtgtctattattgaactacacagaaataagaagtgtctgcatttgcta
tggattagttcccaagaatgggtggaagcagtggtgagatgtgctaagcttccagctata
gcatttacacagtgcactgaaaaagcacctggacactgtgcgagaggttcanaacaagct
tctaactctgtgcagcactcctgtgtgcagttgatacgcagccttcttagagaaggctat
caaattggacagcatgctctttgcaagcaatacctagataaaatcaatttacttctgcga
ggaaatctatctttaggttggcagctgaacattcaggaaacccaggaattacaaacatgt
ttaaagcaagttataagaagtataaagtacagagcagtgaatacctctgtgcctgtagga
aacaatacaaactctacaactttgcctaccatttctataaagcaggagaagagtccatgt
ggaggtgaatgcaagatgagtgtacatggcagagatgactttagttcaccgtttgctctc
atgtcgaagggaggtggagatgaagattgtgaagagaaacctttctctagaaggaagagt
gcctgggaagaggaatgcggagatgcatctaaaagctcaagattttggacatccgctgag
aaccttgtgatgaatattaaaaaggaattagatgacttgacaactccggaatatgtctgc
ccacagaactctctggcaacaaaagtatgtggaaaagctcaggaaaataggatcagtgat
cctgtggcagggaagtgtgatatgggtaatcagtgctttaatccaaatgcccgacattca
gatttcagaagaggcggagagttggaaaacaaatgtgaagcaggacccatagcaccaatg
tgtctgggtgctcaaactcgtattggttctccagaacacgtttacagctcggatgtaaag
gaaagctgtatgtctcccagttccccttcaaagtgtaaagtagatctgcataaagttacc
aatttgaaaaacaagttacggaaaatggaatggcccgcaaaactattgcagccagtcaag
ccacgtggcttgaaaagctgcagcaaaacagcgagagcttcaaaaatagcggcagagcaa
ccaaagctctgcactggctatctgtgtacaagcaaagattgtcttaaacatcagagagtg
aatactgtgtgtgaaaatgaaaaatctgttgatactcgatctccaaggagttgtgaaagt
acacaggagaaaagtgtcaacagtgcttttcagtccagactggaccttgctaaacgggta
ttgccactagattgctctagcttctctaaaaacgaacctggtgtgcaggaaaatgacgat
ggcagtattttgcatttagggtttagtgacaactcactgaaaaaagtatcctctgaagaa
aaatcaaggtcgttgttggagtctgtttttgagaaagacaacgacatgcaaacttcggat
ggggaacagcctaatttaaatgacttggttaaatatgattgtaaaggtcaaatttcaaag
acattttgtacggataaaacttcagcaaatggtcatgttccatctagctcagaaaacaag
aaggatatatccagtgcagcttctcggatcaggccactgtcagtgaagtgtgaatcaagt
gacaggctgtacaaattttcagaatatttcaagagagaagaagtttcagtggtgaagaaa
gaggaagattttgcaaagatgacttctgaagacagtactttaacagactctcaggtcgat
agagagctcagtaagttatctttagctgcatatgctaaaagcgtcaattttccctttgat
tcaagccaagaaggctcagtacatcataatttgtgcgatattaaaaggaaagtgaaaggt
gctgtaagatcttccagtgatggccagagtaccacgtctctctgtgattcagattgccgt
gctgataaagtcatcataatttcagactcttctgatgaagaacaaggtgtggctggcaag
gaggaaacaaaaagcaatgaaaatgtgtgtcctgaagggcagtcttcaacttccagcagc
atttctgatagcggtatcaaaatggaatcaaagacaccaagttctcctttgtcactggaa
gactgtgagtctcagtactttgaatttgaaacagaagttgatgtcttttcagtctggcaa
gatactcaagcgtacagtatggaagcaactcaagagtataaacaagatcatgtttcaaca
gcagttggcagtagtaattcagatgacttactggacgatcacacaaatgaatggggttat
gatgtggattgcataaattatgataccatggaagaagcggcaaacttgacagaaaagcag
acagataatatttctaatcagaaagaagctgataatacaaaagaagtaactaattcaaca
ttgcaagaatttgttagtaagggaaatacaaaagatcaactggaaaattttgcagacaaa
ggtactgttgctgaagactccaccctggtctcaaaattgacccaacctagagcatctaca
tctaacatctcattagcttcaaagttggcccttaagaaaaatagtgtgagtccacaaaag
agtacagcaaaatctaaggtagcaagaactattcaaagaagtcctaaaaaacctcttgtt
gttaaaacagcacaaaataaaaaagtacttcaaagtacatccaaaaattctctggctggc
aggtcattgcctgctgtggttcctccgaggaaagttcgtccatgtcctgcaccagcatca
actgtagaaaaacttggtctgaagaaggcgccccgcaaagcagctgaattatcccagcgc
tctttagatagcgtagctcaactgcgcagctatggtaaagccgcggggagagttggagtt
gcacagaaacagaagagtaaactaattgctcctcagagtttgtcagtaaaacataataaa
aaatttctagcctgccaagaccttcagtatttaaggcagacaaggcccaaaaagagcgtc
agagtgacaaatcttgcaggaagttctgcaaatagaaataaaaaagttagcgaagtggat
gcaaaatctaggaaacaaaagctggaaagttttgaactggcagctgttgaaggatttgtt
gaaaaccagagagggaaaaaaagggaggagatggtttgtctatctatggatttaagtttc
tcttccactgcccttgttggaggtgataaaggtgaaccttcaggaaagggttgcattgtc
caacctgaatgtgagaagacaactccaaaagaaaatgggtgtaaaccaaatgaaaacagt
gaagatgaggatggtgatgatctgtttttaactcagttagaccctgtggatatggaatta
tgttctcaggaagaaagcgttcaagatactacaatagccagtaagaaaacagaggaaatg
gatactgctgaaagccttcagcagaatgaatcctcaactactgtgaagtgtaagtacaaa
gactgcgtggaagaagtggaaaaaccaggagagtactgtagtaagcattcagccaccagc
tcagaagcagatcacttgtttgccaaacctctccctccaccttctaaagcaagaaggcct
tccactaccaaaattttcagctctgcaagctcttcacggaatgcagccttcagcaaggat
cttgaaaatgttaaaaagctgctgccagcttcaaaaagcaaagtgaatgcagcgaaaccg
gtggtggtcaggccaccaattgcagaggccataccaataggaaataaaccatgcaagttg
ccaagtttcaataatgcacctccaccccgtattactaataatgttctccagccacaaaat
aggcagaacaacaatgcttcaaatatttgcagaaggcctgatcaaggaacacgtagttct
tgcttgcttggagctcagcagcgtgatcatagtatttttattaatgaagtcataaagtgg
acttacgaaatgtttgcaaacttcatccaatttggacctccatgtaatctcctgcagtcc
atagtagcctctgttcctgtccagtttcagggatacaatgactattttaatacatttttc
cctttgatgatgctaaatgcctttgaaacactggcacaagactggatagaaaaccagaga
gtaagagagaagagttactacttctacttacagagcttctctgccgaattgaatacagca
gtttttacagctcattttcaagaaagtgatctggcaaagcagcttcatccaaaggaggat
gacttaatctttctggtggtccaaaagaaaaaagacacctttagggaaggaagcgagatg
gaaaaccatatagtgcagcacgttggtctagtgacacgattttctcatgcgtctggccgt
tcaactagacaaaaggaccagcatacggtctgtcatctttctgtgcaaactcgaggcgat
ttgtcattcttcataaataagcaagtgaagtgtgtggtggttggctccctggtgaccaca
cgccgagcattcaaaggtctactactactgagcaggagtcccctggctaaacccattata
aatccaacttacagtgacttctgtccaagagatttgcctgtggtttcaagtgctgcactg
gatatgaaagaatacaatgaagatcaaaagagagccattgagacagcttatgccatggta
aagcaacatccagggcttcccaagatctgcctcatccatggaccacctggaacagggaaa
tcaaaaactattgtgggatttctgtctcgtgttttgagagaaaaccctaggaatgagaaa
gcaactcaaaatacaaattccaagatcaagccaaaccgttttctagtttgtgcaccatca
aatgctgctgttgatgaactcatgaaaaagatcatcgttgcatttaagggaaaatgccaa
aacagacaggagcctttgggaaattgtggcgatatcaaattagtgcgacttggtgctgaa
aaaacaatcaacagtgaagtccggggatttagcctggataagcaagttgaacacagaatg
aaacgaaagccagctgactctgaccaggatattcagaagaaaaaagcagctttagatcaa
cagctggacatgctgtctcgtcagcgtgctatgcacagatgtgagaagagggagagtcaa
atgttagatgatgaaattggcagactttcgaaggagagacaacagcttgcttctcaacta
aaggaggttcgggggcactctcagaaagtccaggcggatatcatcttggagtccgacatc
atctgctgcacactgagcacaagtggaggaagtctgctggaatctgttttttggaggcaa
ggacttgatcctttcagctgtgttattgtggatgaggcagggcagtcctgtgaggttgaa
acactgattccactggtccatcgctgtagtaaacttgtccttgttggagatcccagacag
ctccctcctactgtaaaatcaataaaagctcaggaatatggctatgatcagtccttgatg
gcacgcctgcacagacacctggtggagcaagtgcagaagaatgttttacggagcctgcca
gttgtgcagctgactgtgcagtacaggatgcaccctgacatctgcctcttcccatccaat
tatgtttatggcaggactctaaagactgacaaagcaacagaagagaacagatgttcttca
gagtggccattccagccctaccttatttttgatgtaggagatggtcgtgaggagcgagac
aatgactcttttagtaatcctcaggaagtgaagctggtgatggaattaattagaacaatt
aaagaaaaaaggaaggatctgggccttcgtcgcattggaataattaccccttacagcgca
cagaaaaagaaaatccaagaacaactggacagagtgtttaagaataacagccctggagaa
gtggacacagtggatgcattccagggacgagagaaagactgcatcatagtgacatgtgtc
cgggcgaacagcactaaagggtcaattgggtttctggcaagtcttcagcgtctgaacgtt
acaattactcgagccagatttagcctcttcatccttggaagactgaaaacactcatggaa
aataaagactggaatgaattgattcaggatgctcagaaaagaggagccattatcaagaca
tcagaaaacagctacaggaaagatgctgctaggattttgaagctcaaggcaacagtacag
cccccagccaaagcagggtcaaagaaatctcagttgcaggtttgctcttccagtagcaaa
agcggtgagcttgctaatccaagggaggccagcagtctgcaggaacccactgatggcact
ggccatgctgcccatgcagcaccccaaggaagcagagggccccagcagccacagggagct
caggctgcagactccaggagagacagtgcctctgtgcccgtggaggctgcagcgcttcct
gctcatccagagaaaccacgggatccgaggctggcaagtatggctagtagaactgaaaca
aaagggaagaagcaggcctcaaaagacagtaattgctcaggatcaacatcacagcaaggc
cttgatgctgcacgggatcagatgtccagaacagaagcttctaagaagccccagcaaatg
atggaacaacgcgacatgccttccgtgtcgccttatgcagctcgccgcgagggtgacccg
agagctcctgtactgaaaagcagttcaaaagcccacagtgaaggaggtcgaagtactggc
agtgagtggaacaaagactgtcgtgatttaaccaggagatcatcagaggcatcactagag
aatgcagaatcaaacaatgtcaagcgaagaaagacctctcgctggctttag
DBGET
integrated database retrieval system
