Mesitornis unicolor (brown roatelo): 104544032
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Entry
104544032 CDS
T08455
Symbol
PDCD11
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mui03009
]
104544032 (PDCD11)
Ribosome biogenesis [BR:
mui03009
]
Eukaryotic type
90S particles
Other 90S particles
104544032 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
HAT_PRP39_C
OB_RRP5
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
ARM_TT21
TPR_12
Motif
Other DBs
NCBI-GeneID:
104544032
NCBI-ProteinID:
XP_010187074
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MASIEENFPRGGIQKKPTEGKTANSKLERDNLFDVHHEEQSQKRKRSQRDQGKQKKFKAD
RTVTTKDTVVNIEPLTVEGLCEGMLLLGCIKEVSDYELVISLPNGLSGFVPVTQISDAYS
KLLSKQVAQGELLEDLNSLPDMYSPGTLVRCIVTSVEKNADGRRSVKLSIDPKMVNKGLS
ASALTLGMLLSGAVSSVEDHGYLIDTGVNGTHAFLPCQKAQNYIKAVNKGSDLKIGQNLN
CIIVEVKNEGRVVRLSIDRSEVAASLATERQNWTLSNLLPGLVVKARVQKVAPLGIKVSF
LSSFTGIVDFMHMDLEKSINYSPDQVVKACILSIHPTSKVVRLTLRQAFLRPGGSPNQLS
NARMGVVVEESTVKAFYKQFGAVFELDDGTLAFARLKHLSKTRKSFKPGAFKAGCKHKCR
IIDYSLMDEMSVVSLKYQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVTDGIRGLV
PSMHLADVILKQPEKKYSIGDEVRCRVLECNPAGKKLILTLKKSLIQSKLPVLFNYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPVSCPDKAFHEGQVVRVMVLKCE
PQQERLLLSFRLSSKPAPGDKEECSPKKKQEVKYQIGEMIDVKVLKKKDNGLEVSILEDE
GNVLAFIPTVHLSDFVTNCKLLWHCLQEGDVLPRVMCLSDKGDRIILSRKSAVISAVQKE
QVVRNFSEIQLGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSATESFALLNQYFKEMEEIRNLLRKREESSM
ARGLCELVPGKELQLVVQDVKEDGSALFSGXXXXXXWXPATRYHLGDKSIVPGEKIKALV
LHLDALTSKVYVSLREELLKQRGKQRLTENSQHSAIVQHIAEEFAIVSLEKGQLAAIPIA
SHFNDTFRFDSEKLKSGQTISATLKVVKVNDHGVSLAVQGPAKKNVFVRVRNESETALEE
MLATVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTFTLKA
GQKVAARVIGCRDVNTHRYLPITHPHFTRSIPELSIRPSEVEGKVTAMLNFEEDSALKKP
GLYHVGQTVTCFVKKYNLLKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQAI
PATVTGTDATERNLCLSLTGIQSLEQGTITVGTVTKVTPHTGLTVALPGGKTGKVSIFHL
NDTYAENPLSDFKVGKAVRCYILSNENGKIQLSLRQSRLNPKSNRKVEDVEITCIKDVKK
GQLVRGYVKSIAPSGVLFGLSTSLLGRILFQNVSPYFVQKHSLYETYLPEGKLLTAKVLG
VNGKEKHIELSLLPKDTGMPSILPESLGLPQYDAEEEKKETHGRAKREELKLKTKQRRGN
SESEQEAKPKKRKICPADENDSGIEVYYREEDDVDQEEEAAKKKSKIRKPGEAPRLQVPM
GFTWEEDMPVLNQKEESSESEEEEDPQSKLKKQTKKEKELEKQKKEKELCKLEAALMDPN
RQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREEQEKLN
VWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKHKQAEELYHTMLK
RFRQEKSVWLKYAAFLLKQGQIEATHRLLERALKALPTKEHVDVISRFGQLEFRFGDPEH
AKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEIRDIFERVIHLSLAPKKMKFFFKRYL
DYEKKFGTTESVLAVKRAALEYVETKSSLADT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatagaagaaaactttcctcgaggcggtatccagaaaaaacccacagaggga
aaaacagccaactccaagttagagcgggacaatttgtttgatgttcaccatgaagaacaa
tcccagaagagaaaaagaagccaaagggatcagggaaagcagaaaaagttcaaggcagac
agaacagtcactactaaagacactgttgtgaatattgaaccactcacagttgaggggctc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgactacgagctcgtcatc
agcttgcctaatggactttcaggatttgtgccagtcacgcagatcagcgatgcctacagc
aaattgctgagcaagcaggtggcccaaggagaactcttggaggacttgaattcgctgccg
gacatgtattctccagggacactggtccggtgcattgttaccagtgttgagaaaaatgct
gatggacgtcggagtgtcaaattatcgatcgaccccaagatggtcaataagggtctgagt
gcttcagcgctaacattgggcatgctgctctctggtgcagtgtctagcgtggaagaccat
ggctacctcattgatactggagtcaatgggactcatgcttttctgccctgtcagaaagcc
cagaattacatcaaagcagtcaataaaggttctgacttgaaaataggccagaacctgaac
tgtatcattgttgaagtcaagaatgagggaagagtggtccgtttgtccattgatcgatca
gaggttgctgcatctcttgcaacagagcgacaaaactggacgctctctaatttattgcca
gggctggtggtgaaagctcgagtgcagaaggtggccccactcgggatcaaagtgagcttt
ctgtcttccttcactggcattgtggatttcatgcacatggacttggagaaatccataaac
tattctccagatcaagtggtgaaagcttgcatcctctctatccaccccacctccaaggtg
gtgcggctcactctgcggcaggccttcctccggcctggcggatctccaaaccagctctcc
aatgctcgcatgggggtggtggtggaagagtcaacagtgaaagctttctacaagcagttt
ggtgccgtgttcgagcttgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaccagaaaatcctttaaacctggggcatttaaggcaggatgcaagcacaaatgtcgg
atcattgactacagcctgatggatgagatgtctgttgtatctctgaagtatcagattatt
gaagcgcggtttctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg
tttgcattgaaacccattgggatgcaagtgaaagtgactgatgggattagagggctggta
ccgtccatgcatcttgctgatgtgatcctgaagcagcctgagaagaagtacagcatagga
gatgaagtcaggtgtcgggtgctagagtgcaaccctgcaggaaagaagctgatccttact
ctaaagaaaagccttatccaatcaaagcttccagttctcttcaattatgaagatgcaaaa
ccaggtctgatcacacatggcttcgtggtgtgtgcgagggagtttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagaacccgtatct
tgtccagataaagccttccatgaaggccaggttgttagagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttgttgtccttcaggttatcaagcaagcctgccccaggggac
aaggaggaatgtagtccaaagaagaaacaagaagtgaagtatcaaataggagagatgatt
gatgtgaaagtcttgaagaagaaagataacggactagaggtttctatcttagaagatgaa
ggcaatgtgttagcctttattcccacagtgcacctctctgactttgttactaactgcaag
ctcctgtggcattgtcttcaagaaggagatgtcctgcccagagtcatgtgcctaagtgac
aagggagaccgtattatactgagcagaaagtctgcagtgatttcagctgtacaaaaggag
caagttgtgagaaatttctctgaaatccagcttgggatgctgttgactggttatgtgagg
aacgtgatgccctttggagtgtttgtggagttccctttcggtgtgacaggactggcgccc
aaagtgagcatgagtgacaaatttgtgacagacaccaaggaccactttgtggtggggcag
actgtgatcgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctccttaatctg
aaggtgtcagagtgcagctcaggcgattctgccacagagagctttgccctactgaatcag
tatttcaaggagatggaagaaatcaggaacttgttgagaaaaagagaggagtccagcatg
gcccgaggcctttgtgaattggtgcctgggaaggagctgcagctggtcgtgcaggatgtg
aaggaggatggctcagcactgttcagtggnnnnnnnnnnnnnnnnnnctggnncccagcc
actcgctaccatttgggagacaaaagtattgttcctggtgagaaaatcaaggcattggtt
cttcatctggatgcccttacatccaaggtgtacgtttctcttcgtgaagaactgttaaaa
caaagaggcaagcaacggctcacagagaactcccagcactctgccattgtgcagcacata
gcagaagagtttgccatcgtgtctttggaaaaaggccagctggcagctattcccatagcc
tctcacttcaatgacaccttccgctttgactcagaaaaactgaaatcgggacaaacaatc
tctgcaaccttaaaagtagtgaaggtgaatgaccatggagtctcattagcagttcaaggc
ccagcaaagaagaatgtttttgtgagggtccggaacgaatctgagacggcattagaagag
atgcttgccactgtgaaacactcgctttccctgggggatattgttactggtactgttaaa
tccgtcaaaccaacacatgtcacagttgctattgatgacaagctgacaggttcaatccat
gcatctcggattctggatgaagtgcctataggctcttttccaacatttactctgaaagct
ggacagaaggtggctgcccgagtcattggatgcagagatgtgaatactcacaggtacctg
cccatcacccatccacatttcacacggtccattccagagctcagcattcgaccaagtgaa
gtagaagggaaagttacagcaatgctgaactttgaagaagacagtgccctcaagaaacct
ggactttaccatgttggacagacagtcacctgttttgtgaaaaagtataacttgctcaaa
aattggctggaggtagaagttgctcctgacattcgaggaagagttcctcatctcctgctg
tctctgaacaccaaggtcttaaaacatccagaaaagagcttcaaaaatggtcaggcaata
ccagctacagtgactggcacagatgccactgaaagaaacctctgcttgtcactcacagga
attcagtcactggagcagggcaccatcactgtaggcacagtaacaaaggtgactccgcat
actggtttgactgttgcactgccaggtgggaagactggcaaagtcagcatctttcacctg
aatgatacttacgcagaaaatcctctgagtgacttcaaagttggcaaggctgttaggtgt
tacatcctctccaatgagaatggcaaaatccagttatctctccggcaatcccggctaaac
ccaaagagcaacaggaaagtggaggatgttgaaataacatgtattaaggatgttaaaaaa
ggccagctagtgagaggctatgtcaagtcaatcgctccatcaggtgtattgtttggcttg
tccacttctcttctgggccgaatcctgttccagaatgtttccccttactttgttcagaaa
cactcattatatgaaacgtacctgcctgaaggaaagctgctcactgccaaggtgcttggt
gtaaatggaaaagaaaaacacattgagctctctctcctgcccaaggacactgggatgcca
agcatcttgcctgaatccctaggcctaccacaatatgatgcagaggaagagaaaaaagag
acgcatggtagggcaaagagagaagagcttaagctgaagacaaaacagagaagaggaaac
tctgaaagtgagcaggaagcaaagccaaaaaaaaggaagatctgcccagcagatgaaaat
gacagtggaattgaggtatattaccgggaggaagatgatgttgaccaggaggaagaggca
gctaaaaagaaatctaagataaggaaacctggagaagctcccaggctgcaggttcccatg
ggcttcacctgggaggaggacatgcctgtgctgaatcagaaggaagagagctcggagagc
gaggaagaggaggatccgcagtcgaagctgaagaaacaaacaaagaaggagaaggagcta
gagaagcagaagaaggagaaggagctctgcaaattagaggcagccctgatggaccccaat
cgacagccccagtcagcagatgactttgaccgcctggtgctgagcagtcccaacagctcc
attctctggctgcagtacatggctttccaccttcaggctacggagattgagaaggccaga
gctgtggcagagagagcgcttaaaacaatctgcttcagggaagaacaggagaagctgaat
gtctgggtagctctgctgaacttggagaacatgtatggtactgaggagacactgatgaag
gtctttgagagagctgttcaatacaatgaacctctgaaagtcttccagcatctgtgtgac
atctatgccaattctgagaaacacaagcaagcagaagaattgtaccacacaatgctgaag
cgtttccgtcaggagaaatctgtgtggctgaaatatgctgctttccttctgaagcaaggc
cagatagaggctacacacaggcttttggagcgtgctctcaaggctttgcccaccaaagaa
catgtggatgtcatttcaaggtttgggcagctggagttccgttttggggacccagaacat
gccaaggccctctttgagagcaccctcagcagctatcccaagcggacagacatctggtcc
atctacatggacatcatgatcaaacatggcagtcagaaggaaatacgggacatctttgag
agggtcatacacctgagcttggcaccaaagaagatgaagttcttctttaaacgctacctg
gattatgagaagaaatttggtacaacagaaagtgtcctggctgttaaaagagcagcactt
gagtatgtggagaccaagagttcccttgctgacacctaa
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integrated database retrieval system
