Mesitornis unicolor (brown roatelo): 104544227
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Entry
104544227 CDS
T08455
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104544227 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104544227 (EDC4)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104544227 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104544227 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104544227
NCBI-ProteinID:
XP_010187345
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
SVNENQRPSNSYNGDLNGLLVPDPIVTGDGPSLSKPVHRSISLGALQEKQVICLSGDDSS
TCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYA
IRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAM
DKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWD
LDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYI
EGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSW
TCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFS
SISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKL
FCVHTKALQDVQIRFQPLHSPDMSASMPSHGSHEEFAFPDHMADLSTEGLGSEKGSVHGS
QPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSASLQQIAVSPGSSVSSLTAVTAM
SSTSVTDTSMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHPVLIPGLSDKLTPKA
PVPVRLQVTPGNPSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETL
QRSFAAAPSGLPAEVLEPSHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRL
NAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHS
YHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKR
KGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRLTDHLDAI
QSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERT
IREEMKKTVPQCISKSVDPVAGQLSNTIAAKLTAVEGTLKESITKLVKSKNLTDTIVRAT
ADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHLKNKKVR
EQEARDPLLNQLRQLISTFQSTTEQLASTIAASVHAEVQHQLHIIVGNMQESILAQVQRV
IKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPAAHLDFQSQQTHILQLLQQGHLNQAFQ
QALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEE
AVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4142 nt
NT seq
+upstream
nt +downstream
nt
gttcagtgaacgagaaccagagaccatcaaattcgtacaacggagacctgaatggactgc
tggtgcctgatcccatcgtgactggagatggaccttctttgtctaagccagtgcatcgca
gcatttctctgggagccctgcaggagaagcaagtcatctgcctttctggtgatgacagct
ccacttgtgtagtgatatctgctaaagatgtggagatagtggccagcagtgattccagca
tcaccagtaaggccagagggagtaacaaggtgaaaatacagcccgttgctagatatgact
gggagcagaaatactattatggcaatctgatagctgtttcaaactcttacctggcttatg
ccattagagctgccagtaatggctctgctatggtgcgagtgttgagcgtcagcactgctg
agcggaccttgctgaaaggattcacgggcggtgtggcagacctggcttttgctcatctca
actccaaccagctggcgtgcctggatgaggctggcaacctttttgtctggcgcctggcca
tggataaagagaaaatccaagaggagatcttggtcaacatcaagcgacctgacaataccc
cattgaacacctctcgaagaatcatctggtgccctttcatcccagatgataatgaggaga
gcggtgaagagggaagtcagacattggcgttgttgcatgaggacagggcagaggtgtggg
atttggacattatccgaacgaacaacagctcctggccagtggaagtgcctagcatcaaag
aaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgagggagcactttctccag
atggaactgtgttggccacagcaagccatgatggttttgtcaaattctggcagatctata
ttgagggacaggacgagccaaggtgtcttcatgagtggaaaccccatgatggtagacctc
tttcctgcctgctcttctgtgacaaccataaaaaacaagacccagaggttcccttctgga
gatttctcatcacaggagcagatcagaacagagaactgaagatgtggtgcactgtgtctt
ggacctgtctgcaaactgtccgcttttctcctgacatcttcagttccatgagtattcttc
ccagcctgaaagtttgcttggacctctccgctgaatacctgattctgagtgatgtgcaga
gaaaagtcttgtatgtgatggagctgatgcagaaccaggaggagggaaaagcttacttca
gctccatctccgagttcctccttacccatccggtcctaagctttggcatccaggcagtga
gccgctgccggttaaggcacactgaagtgctcccagcggaagaggaaaatgacaacttga
gtgtagaaggtgctcagggagccggggctgttgaatcagcagcaggcgtactgataaaac
tcttctgtgtgcacaccaaggcactacaggatgtgcagattagatttcagcctcttcata
gccctgacatgagcgcttccatgccttcccatggatcccatgaagaatttgcctttccag
accacatggctgatctaagcacagaagggctgggatctgaaaaaggatcggtgcatggct
ctcaaccagacctgcggcgcattgctgatctgcctgtaccagcagactttctgtctctct
caaatgatgccaaacctaagctgatgactccagatgcattcatgacaccaagtgcatctc
ttcaacagatcgctgtatctccaggcagcagcgttagttccctgactgcagtcacagcca
tgagtagcacttctgtcacggatacttctatgcccaggccatcagaggacttgactgtga
gccccaagatgcagctggacaccagcctcacgctgagtagcagtagcagcagtcttcaga
ctagtcctagaagccatccagttcttatcccagggctctctgacaagctaacaccaaagg
cacctgttccagtaaggctccaagtcacaccaggaaacccttctctagcattggaactgc
aggaggtggagcccttggtggtgccccaagcttctcccacccgtgagcgctcgccagatg
tcatttcctctgcttccacagccatgtcccaagatatcccagagattgcttctgagacct
tgcaacgcagctttgcagcagctccatctgggctccctgcggaggtgctggagcccagtc
atcatgcagacagtatggcttctgctgcctctgccttgcatttgctgtctccgaggaacc
ggcacaactcagagcacagccaccactctttggacatgcctccagtggaggtagacagac
tgaatgctccgtcgttactggagactgctttaactcaggaaaatgcatcttctgacagtg
ttgtgagtcagccatggccagcagctcctgacataaccagagaaaccaggaacagcatgg
cagacagcccaagggacgaggttgaagaaaagcacaagagctcttcgtatcatcgacaca
gctaccacctgctgcagcatgacagccaggacgctagtgcagaacaaagtgaccatgatg
atgaagttgcaagcttggcttctacgtcaggtggatttggtgccaaagcatctacgcaga
ggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaagctaaagc
ggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatctaacaaccagg
tcacaccagagttccaggatgagctgatgtgcatattgaggagccagcagcgggagctct
ctgagctgcgtcagaaccagatggagctgctgcagagactcacggatcaccttgatgcca
ttcagagctccctcatgggccacgtggagagggtgattgactcccagcaggagcaggagc
agagaagactagatcgagcgctgacagaaggacagcagcgcaatgggcagctccaggaac
atctctctcagcagctgtcgcaatccctttccactgctgtgtgtaaccgtctggagagga
ccattcgcgaggagatgaagaagactgtacctcagtgcatttccaagagcgtggaccctg
ttgctggacagctaagtaacactattgctgccaagctcactgctgttgaggggacactga
aggagagtatcaccaagctagtgaaatcaaagaaccttacagataccattgtgagggcaa
cagccgataccctccaggggccgatccagtcagcttacagggaagcgtttcaaagtgttg
tgttgccagctttcgagaagagctgccagtccatgttccagcaaatcaatgacaccttca
agcagggcacgcaggaatatatccaacagctcgagactcacttgaagaacaagaaggtac
gagaacaggaggcccgggacccgctgctgaatcagcttcggcagctcatcagcaccttcc
agagcaccaccgagcagctggcttctactatagcagccagcgtccatgctgaggtgcagc
atcagctgcatattatcgtgggcaacatgcaggagtctattttggcccaggtgcagagag
tcattaaaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacctcgagca
tcgtccaggcaatgcgctcagcggccgggactccaatccctgctgctcacttggacttcc
agtctcagcaaactcacatccttcagctgctccagcaaggacacctcaaccaagctttcc
agcaggctctaacagcagctgatctcaacctggttctgtacgtctgtgagactgtggata
ctcagcaagtattcgggcagcatccatgcccgctgtcccagcctgtgctgctctctctca
ttcagcagctctcctcagatttgggtactcgaacggaactgaagttgaattacttggagg
aagcagtgatgcacctggaccacagtgaccccatcacccgagaccacatggggtcagtca
tgaaccaggtgcggcagaaactcttccagttcctccaggtggaaccccacaacacgctga
gcaagcctgcccgtcgcctcatgatcatgctccagggcctggtcacccctggcatgacct
ag
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integrated database retrieval system
