Mesitornis unicolor (brown roatelo): 104545232
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Entry
104545232 CDS
T08455
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mui03000
]
104545232 (RC3H1)
04121 Ubiquitin system [BR:
mui04121
]
104545232 (RC3H1)
Transcription factors [BR:
mui03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104545232 (RC3H1)
Ubiquitin system [BR:
mui04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104545232 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-C3HC4_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf_CCCH_4
zf-CCCH_4
zf-C3HC4_2
FYVE
PaaA_PaaC
Baculo_IE-1
Vesi_VP2
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104545232
NCBI-ProteinID:
XP_010188622
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLASGAILSEE
GGVDLPSRKTPALPNGIVSTGSTVTPLISRGTDSGYESALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARAPTDLPSVSVTKQLQIVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYAPYLQDRVVSPQYPQPQCM
AQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQPEGYCP
VAPHLSQIRPSCHRYMVAILSDTFLYSFQPHPSLDELHRRRKEIMAQLEERKVISPPPFA
PSPTLPHPFHSEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARS
VEMA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctttcctgcccgatttgcacacagact
ttcgatgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaacttcttcctgtgaactcggccttgctgcaactagtgggtgctcaggttcctgaa
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattggcattgtacctcaaaccactcagcagtgcaagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcctatgcaaaggaaacttgtgacatta
gttcattgccagctggtggaggaagaagggcggatcagagccatgcgtgcagcacggtca
cttggtgaaagaacggtcacagagctcattcttcagcatcaaaatcctcaacagctctct
tccaacctctgggctgcagtgagagccagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggctctagaagatggatctgctttgtcacgaaaa
gtcttggttctctttgtggttcagaggctggagccacgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcgtgcttcaaggtgacgaagcga
gatgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctctgaga
agggaacacgattcccagatagttcaaattgccatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgctgtatggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcggcctcacctagagctcctg
gcaaatattgatcctagtccagatgctccccctccaacgtgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacaa
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt
gcctccctgggccagctgaacgaggtgggcctggcttcaggagccatcctctcagaggaa
gggggagtggacttgcccagtaggaaaacgcctgctctgccaaatggaattgtgtcaaca
ggcagcacagtgacgccacttatttcccgagggactgactccggttacgaatctgctctg
aagccagggaagatggaccacctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctgtccccaagagctctatttctgccttaccagtcaaccctcatcctgtgcctgct
cgggcacccacagatctgccttcagtgtctgtcaccaagcagttgcaaattgtaccacga
gggtctcagctgtataatactcagcaagcagatatgttttatcaagatcctagaggagct
gccccaccatttgagccagcaccctaccaacaaggagtttactatcccactcagtccatg
tctcgctttgtccgacctcctccatcagctcctgaacctggtccaccctacctagaccat
tacgcgccgtatcttcaggatcgtgtcgtgagcccacagtacccgcagccacagtgtatg
gcgcaacccatatacccaccgcactatgacagccgtcgtgtgtatccccccgtccagccg
tatcagcgagaggagattgtccggggaagccctgtacccattgaaattccacaagcagct
gtaccttcctacgtacctgaatccagagacagataccagcaaccagagggttattgccca
gtggctccacatctcagtcagatcagaccttcatgccacaggtacatggttgccatactc
tctgacacatttctgtattcatttcagcctcatcccagcctggatgaacttcaccggcga
aggaaggagatcatggcgcagctggaagagaggaaggtgatttctccacctccttttgca
ccatcaccaaccttgcctcatccttttcattcagaggagtacttggatgaagacctgaag
gtagctgggaaatacaaaggaaatgactacagccagtactctccctggtcctgtgacacc
atcggctcctacattggaaccaaagatgcaaaacccaaagatgttgtggcagcaaggagt
gtggagatggcg
DBGET
integrated database retrieval system
