Mesitornis unicolor (brown roatelo): 104545992
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Entry
104545992 CDS
T08455
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mui03041
]
104545992 (DDX1)
03016 Transfer RNA biogenesis [BR:
mui03016
]
104545992 (DDX1)
Enzymes [BR:
mui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104545992 (DDX1)
Spliceosome [BR:
mui03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104545992 (DDX1)
Transfer RNA biogenesis [BR:
mui03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104545992 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104545992
NCBI-ProteinID:
XP_010189569
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPQHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIDLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLDRFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttcttcctacggatatccaagcagaatccatcccactgatcctgggaggtggt
gatgttcttatggctgctgaaacagggagtggaaaaactggtgcttttagtattccagtt
atccagattgtttacgaaacgctgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaactggtggagcagtgctcaataagtggcaaatgaacccatacgatagaggatca
gcttttgcaattggatcagacggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcgactagaggtgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagacttgggcact
gataaatttggctttggctttggtggcactggtaagaagtctcacaacaagcaatttgac
agctatggtgaggagttcactatgcatgatacaattgggtgttacttagacttagataaa
ggacaaataaagttttccaaaaatggaaaggaccttggccttgcctttgaaatcccacag
cacataaggaaccaggcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagatggctatattgatctttgcaag
gctcctgatggtagtgttgtaaaatcacaacactcaggaaatgcacaagtggttcaaaca
cagaaccttccaaatgctccaaaagcattgattgtagaaccatcaagagagctggccgaa
caaactttgaacaatgtgaagcagttcaaaaaatatgtcgataatcccaaattaagggaa
ctgttgattattggtggcgttgctgcaagagatcaactctctgtactggaacaaggagtg
gatattgtcgttgggactcctggaaggctggatgacctggtgtcaacgggaaagcttaat
ttatctcaagttagattcctggttctggatgaagccgatggccttctcctccaaggttat
tcagatttcataaacagaatccatagtcagattcctcagataacttcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtcaatccaaaagctgacaaactctgggaaaggcttggc
aagaatcatattagaactgatgaggtacatgcaaaagacaatacacgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacaccgttcgtgca
atcaaagaacacaagatggaccaagccattatcttctgcagaactaaaatagattgtgat
aatatggagcagtacttcatccagcagggtggaggccctgataggaagggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggacaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgac
attcatggtgttccatatgttatcaacgtcacactccctgatgaaaaacagaactatgtt
catcgaattgggagagtaggcagagctgagaggatgggtttggcaatctcccttgtggca
aaagagaaggaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttataat
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgctcaagtcgaaccagacataaaagtacca
gtagatgattttgatgggaaagttacatatgggcagaaaagagctcttggtggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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