Mesitornis unicolor (brown roatelo): 104547883
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Entry
104547883 CDS
T08455
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104547883 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mui03041
]
104547883 (SF3B1)
03036 Chromosome and associated proteins [BR:
mui03036
]
104547883 (SF3B1)
Spliceosome [BR:
mui03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104547883 (SF3B1)
Complex B
104547883 (SF3B1)
Complex C
U2 SnRNP specific factors
104547883 (SF3B1)
Chromosome and associated proteins [BR:
mui03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104547883 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
104547883
NCBI-ProteinID:
XP_010192048
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MASRGDQLDQDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIA
ATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYK
KHRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKG
SETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERD
TPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGT
PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARH
TGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIE
SFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDE
EMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELAN
KVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQE
QTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVM
KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTP
ILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG
YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN
VQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGF
GCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVR
DVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagaggtgatcagttagaccaggatatcgaagcacaaattcgagaaattcaa
ggaaaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattat
gatcaagaaatttatggaggcagtgacagcaggtttgctggatatgtcacttctattgca
gcaactgaattggaagatgatgatgatgactacccttctacaagtttgcttggccagaag
aagccggggtaccatgctccagtggcattgcttaatgacataccacagtctactgaacag
tatgatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaa
aagcacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggaggg
aagaccccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcat
ttaacaaaagaagagagggaaattaggcagcaactagctgaaaaagctaaagctggagag
cttaaagtcgtcaatggagccgcatctcagccaccttcaaaacgcaaacgacgttgggat
cagacagctgatcagactcctggtgctactcctaaaaaattatccagttgggatcaagca
gagactcctggacatacaccatctctgcgatgggatgaaactccaggccgtgctaagggt
agcgaaactcctggtgccaccccaggctcaaaaatatgggatccgactcccagccatacc
ccagcaggagctgcaacacctggacgggacacgcctggtcatgcaacaccaggccacgga
ggtgccacttccagcgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagat
actccgggacatggcagtggatgggctgagacaccccgtacagatagaggtggtgactcc
attggtgagacaccaactccaggagcaagtaaacgaaagtcacgatgggatgaaacacct
gctagccagatgggtggcagcactcctgttctgacgcctggcaaaacacccattggtaca
ccggctatgaacatggcaactccgacaccaggtcatataatgagcatgactcctgagcag
ctgcaggcttggcgttgggaaagggaaattgatgagagaaacagaccactttctgatgaa
gaattggatgctatgtttccagaaggatataaggttcttcccccaccagctggttatgta
cccattcgcactccagctcgtaagcttacagcaactccaacacctttgggtggtatgact
ggattccacatgcagacagaagaccggactatgaagagtgttaatgatcagccatctggc
aatcttccattcctgaaaccagatgatatccaatactttgataaactgctggttgatgtt
gatgaatcaactctcagtcctgaagaacagaaagagagaaaaataatgaaattacttctg
aaaataaagaatggcacacctcccatgagaaaggctgcattacgacaaattactgataaa
gctcgggaatttggagcagggccgttgtttaatcagattctgcctctgctgatgtcacca
acacttgaagatcaggagcgtcacttgcttgtcaaagtcattgacagaattctttacaaa
ctggatgacttggtccgaccatatgtacacaagatccttgttgtcattgaaccactgctg
attgatgaagactactatgctagagtggagggcagagaaattatttcaaacttggctaag
gctgctggtttggcaacaatgatctccacaatgcgacctgatattgataatatggatgaa
tatgtccgaaatacaacagctcgagcctttgctgtcgttgcctctgctttgggcattcct
tctctgttacccttcttgaaagctgtctgtaaaagcaaaaaatcctggcaggctaggcat
actggcatcaagattgtacagcagattgctattcttatgggttgtgctatcttgcctcat
ctcaggagcttggttgaaattattgaacatggtctggtggatgagcagcagaaagttcgc
accatcagtgctttggctattgctgctttggctgaggcagctactccctatggtattgag
tcatttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggt
ttggctgcctttttgaaggctattggttacctgattccactcatggatgctgagtatgca
aactattataccagagaagtcatgctaatccttatcagagagttccagtctcctgatgaa
gagatgaaaaaaattgtgttgaaggtggtaaagcagtgctgtggtacagatggtgtggaa
gcaaactacattaaaacagaaatcttgccaccttttttcaaacacttctggcagcacaga
atggcattggacagaagaaattacagacagttggttgatacaactgtggagctggcaaat
aaagttggagcagcagaaattatttctagaattgtggatgatctgaaagatgaggctgag
cagtacagaaaaatggtcatggaaacaattgagaagataatgggaaatctgggggcagca
gacattgatcataaactggaagaacaacttattgatggtatcttgtacgcctttcaggaa
cagaccacagaggattctgtgatgctgaatggttttggcacagtggttaatgctcttggc
aaaagagttaaaccctacttgccacaaatctgtggtacagttttgtggcgtttgaacaac
aaatcagctaaagttaggcagcaggctgctgacctgatctctcgtactgctgttgtcatg
aagacttgtcaagaggaaaaactgatgggacacttgggtgttgtgttgtatgagtacctg
ggcgaagaatatcctgaagtactgggcagcatactaggagcgcttaaggctatcgtgaac
gttataggtatgcacaaaatgacaccaccaataaaagatctgctgccacggcttacgcct
attctgaagaacagacatgagaaagtacaggaaaattgtatcgatcttgttgggcgtatt
gcagaccgaggtgcagaatatgtttctgcaagagaatggatgaggatctgctttgaactg
cttgaattattaaaagctcacaagaaagctatccgaagagccacagtgaacacttttggt
tatattgcgaaagctattggacctcacgatgtattggctacactgctaaataacttgaag
gtacaggaaaggcagaacagagtatgtactacagtagcaattgctattgtagctgaaaca
tgctcgcctttcacagtgctgcctgcactcatgaatgaatacagagttccagaactgaat
gtccagaatggtgtgttaaaatccctttctttcctgtttgaatacattggagagatggga
aaagattacatttatgctgttacaccactgctggaagatgctttaatggacagggatctt
gtacacaggcaaacagccagtgccgtggtgcagcatatgtcccttggtgtttatgggttt
ggttgtgaagattctcttaatcatttgttaaattacgtatggcctaatgtgtttgaaacc
tctcctcacgtcattcaggcagttatgggagctttggagggcctcagagttgctattggt
ccctgccgaatgttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcaga
gacgtttattggaagatctataattcgatctacatcggatcacaggatgctctgatagca
cattatccaagaatctataacgatgaaaagaacacctacattcgttacgaacttgattac
atcttataa
DBGET
integrated database retrieval system
