Mesitornis unicolor (brown roatelo): 104547922
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Entry
104547922 CDS
T08455
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mui03019
]
104547922 (HTT)
04131 Membrane trafficking [BR:
mui04131
]
104547922 (HTT)
03029 Mitochondrial biogenesis [BR:
mui03029
]
104547922 (HTT)
Messenger RNA biogenesis [BR:
mui03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104547922 (HTT)
Membrane trafficking [BR:
mui04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104547922 (HTT)
Mitochondrial biogenesis [BR:
mui03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104547922 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
104547922
NCBI-ProteinID:
XP_010192096
LinkDB
All DBs
Position
Unknown
AA seq
3105 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAVAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTAAGGIAQVSVSKDESDSR
SRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDAETRSDVSAASFAASVKGEI
ASELASSSGVSTTGSVGSSAADSSGHDIITEQPRSQHTLQSDSVDLTSCDLTSTAAEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSVALQQPHLLKTISHSRQPSDSSVDR
FTSKEDAADPGDHENKPSRIKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIVNSILIKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGVHHYTGLLKLQERVLNDVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSATFPVCTWTVGWHCGVSQPSPSDEAQRGCTIG
MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSTQGAAKQEEP
WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
XXXXXXXXXXERESVEQASVPMSPKKGGETSPAPRQTDATGPVSTSKSSSVGSFYHLPSY
LKLYDVLKATHANYKVTLDLQNTNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGY
LKSCFNREPTMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYH
YCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTNITSAAKHRADKN
AIHHHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVL
KQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVT
HAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCH
KENEDKWKRLSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSM
FVTPKTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQTINRLRC
GENNLSAPEDRTEVKQAKYLPEETFSRFLLQLVGILLEDIVNKQLKVDMNEQQHTFYCQE
LGTLLMCLIHIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLL
WCQILLLVNYTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDLESKRGMCNREIVR
RGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQ
AIQSRCENLAAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLSTPFRVLARMVDTLACRR
VEMLLAATLQNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSP
LVTSHPLDGEDQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFM
ASKEFNLSLLAPCLSLGMIEISRDQKSSLFETARRVTLDRVSATVQNLPANHQVFQPLLP
TEPSAYWKKLSDVFGDEVMYQSMMTLCRALAQYLLLLSKLPAGLRVPSDKEDDILKFVVM
SVEALSWHLMHDQIPLSIDLQAALDCCCLALQQPSLWNLLASAVNVTYACSLINCIRFII
EAVAVEPGNQLLSPERKKNTSKGLSEGEVDSNTQKTKHITAACEMVAEMVECLQTVLALG
HKRNSSIPAFLTPVLKNIIISLARLPIVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPV
EFLQEKEIFKEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQ
INVLAVQAITSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQE
IQAMVSKRDNIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQV
SIHSIWLGNNITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLE
LYSQWILPSNPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEI
LVQYLIPATCKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDE
TAKQLIPIISEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQ
MCGVMVSGSDESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMA
ALGLMLTCMYTGKEKISPSRTIDANAAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVA
RILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVM
LSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAID
FYRHQIDEELDRRAFQSVFEVVASPGTPYYHLLTCLQNVHKVTAC
NT seq
9318 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggccttcgagtcattgcgctccttccagcagcag
cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct
ttaagaaattctccagaatttcagaaactcctggggattgctatggaactcttcctcctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgct
catctagttcggcctcaaaaatgcaggccatacttagtgaaccttttgccctgtctaaca
cgaataagtaagagacccgaagaatcggtgcaagaaacactagctgtggcaataccaaaa
attatggcagcatttggcaattttgcaaacgacaatgagattaaggttttattgaaggct
ttcatagctaatctgaaatccagttcccctactatccgtcgaacagcagcaggatcagca
gtaagcatctgtcagcattcgcgaagaacacagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaagatgaccatcctactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg
aaaggcagttttggcgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt
atacaggtttatgaattgactctgcattacacccaacatcaggaccataacgttgtgact
ggagctttagaattattacagcagctctttagaacgccaccacctgaactcctccatgcc
ctgactgctgcagggggcattgctcaggtcagtgtatccaaagatgaatctgacagcagg
agccgcagtgggagcattgtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcgagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaagatgat
gctgaaactcgatcagatgtcagtgctgcatcgtttgcagcttctgtgaagggcgagata
gccagtgaactggcttcttcatcaggtgtatcgacgactgggtcagtagggagttcagct
gctgattctagtggacatgatatcattactgagcaaccacgttctcaacatacattacag
tcggactctgtagacctgacaagctgcgatttgacaagcacagctgctgaaggggaagaa
gatgatgtgcttagccgaagctccagccagatcagtgctgtccagtcagatcccactatg
gacttgaatgatggtacacaggcttcctcaccgattagtgatagctctcagactactaca
gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttagagggtgct
gaaggacagtattctggaatgcaaattgggcagctgcaggatgaggaagatgaggccgca
aatattctccaagatgattcatcggagtctttcagaaattcttctgttgctcttcaacag
cctcacctgttgaaaaccataagccatagcagacagccttctgatagcagcgtagatcga
tttacatcaaaagaagatgcagcagatcctggtgatcatgaaaataagccttccaggata
aagggagacataggtcactatactgatggaaattcagctcctttagtgcactgcgttcgg
cttctgtcagcctcttttctacttactggggagaaaggagctttagttcctgatagagat
gtgagagtcagtgtaaaagccctcgcagtaagttgtgttggagcagctgttgcacttcac
ccggagtctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtat
gaggagcagtatgtatcagatattctgaactacatcgaccatggagatcctcagattaga
ggagctactgccattctgtgtggaacgattgtcaattccattctaattaaatcccgcttt
gatgtggaaaaatggctaataaatgtcagaagctcaacaggaaacctcttttccttggta
gactgcatacctctgttacagaaaacgctgaaagatgagtcctctgttacatgcaaactg
gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaactg
ggtttacaattaattgttgacctccttacgctgaagaatagctcgtattggctagtaagg
acggaacttctggaaacgcttgcagaggtagattttcggctcgtcagcttcttggaagga
aaaactgagagcttgcacagaggtgttcatcattataccggtctactaaaacttcaggag
agagtgcttaatgatgttgtaatatgtctgcttggagatgaagatccaagagtgagacat
gttgctgcagcttcattaatgaggcttgttccaaagctgttttataactgtgatcaagga
caggctgatccagttgtggcagtggcaagagaccaaagcagtgtctacctgaaactacta
atgcatgaaacacagcctccgtctcactttgcggtgagcactatcaccagaacatacaga
ggttacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctctcaagggtt
attgcagcgatttcccatgctttgacaatatccactacaagagcacttacgtttggctgc
tgtgaagctttgtgtcttctctccgcaacatttccagtctgcacctggactgtgggatgg
cactgtggtgtttcccagccaagtccttcagatgaagctcagaggggctgcaccattgga
atggctggcatggtcctatctctcctttcatcagcatggttcccgctggacctctctgca
catcaggatgctttgattttgactggaaacttgctagcagcaagtgctcccaagtgcttg
aagaatccctggagtgctgaagaagattcaacccaaggtgctgcaaagcaggaggaaccc
tggccagctctggcagaccgaactcttgttactttggtagaacagctcttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagta
aaggcagcattaccttctctgacaaacccaccttctcttagtcctattcggaggaaaggg
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnagagagggagtctgtcgaacaggcatctgtg
ccaatgagccctaaaaagggtggtgaaacaagtccagctccaaggcaaactgatgctact
ggccctgtttcaacaagtaaatcatcttcagttggaagcttttatcatcttccatcatat
ctgaagttatatgatgtcttgaaagcaacccatgctaattataaggttactttggatctc
cagaacactaatgaaaagtttggatgtttcttacggtctgcattagatgttctgtctcaa
atcttggaacttgctactcttcaagacataggaaagtgtgtagaagaaattttgggatac
ctaaaatcatgtttcaacagagaaccaacaatggcaacagtttgtgtacagcagttattg
aaaacattgtttgggacaaatctggcttctcagtacgatggcttgtcttcaaatcccaac
aaagctcaaggcaaagctcaacgcttaggttcttccaatttgagacctggtctctatcat
tactgcttcatggcaccatacacacattttacacaggcccttgctgatgctagtctaagg
aacatggttcaggctgagcaggagcacgatgcttcagggtggtttgatgtgctgcaaaaa
gtttccacacagctgaaaactaacattacgagtgcagcaaaacatcgtgctgataagaat
gctattcaccatcacattcgtttatttgaaccccttgtcataaaagcactgaaacaatat
accacaacaacgtcggtacagctacagagacaagttctagacttgcttgctcaactggtt
cagctacgagtcaactactgtcttctggattcagaccaggtgtttattggatttgtgcta
aagcagtttgaatacattgaagtaggacagttcagggagtctgaagcaattattcctaat
atcttttttttcctggtgttgctgtcttatgagcgatatcattccaaacagataattgga
attcctaagatcattcagctgtgtgatggtatcatggccagtgggaggaaagctgttaca
catgcaataccagctctgcagcccattgttcatgatctgtttgtgttaagaggaacaaat
aaagctgatgctggaaaagagttggaaacacaaaaggaggtggtagtgtcaatgctgctg
agacttattcagtaccatcaggtgctagaaatgttcatcttggtattgcaacagtgtcat
aaagaaaatgaagacaagtggaaaagattgtcccggcaaatagctgacattattctccca
atgcttgcaaaacaacagatgcatatagactctcatgatgctctgggagtattgaacact
ttgtttgaaattttggctccttcatcccttcgccccgtggacatgcttttaaggagtatg
tttgttactcctaaaacaatggcatcagtgagcactgtccagctatggatttctggaatt
ttagctatcctcagagttctgatttcacagtcaacagaagacatcgttctatcccgcata
caagagctttccttctccccatacttgatttcgtgtcaaacaattaacagactgagatgt
ggagaaaataacttatctgcaccagaggatcgcactgaggttaaacaggctaaatatctg
cctgaagagacattttctaggttcttattacaactggttggcattctgctggaagatatt
gttaacaaacaattgaaagtggacatgaatgagcagcaacatactttctactgccaggag
ctgggcacgctgcttatgtgcttaatacatatcttcaaatcagggatgtttagaagaatc
acagctgcagccaccagactttttacaggagacggatctgatggtagtttctataccctt
gaaagtttgagtgacctcgttcagtccatgattcccacacatccttctttagttctcctc
tggtgtcaaatcctgcttcttgtcaattataccaactacaactggtggtcagaagtgcat
caaaccccaaagagacacagtctttctactactaaattgcttagccctcagatctctgga
gacagtgatgaatcggatttagaatctaaacgtggcatgtgcaatcgagagatagtgaga
agaggagcactcattcttttttgtgactatgtttgtcaaaacctacatgattcagaacac
ttgacctggcttattgtgaatcatgttcaagacttgattaatctgtcccatgagcctcca
gtacaagactttattagtgctgttcacaggaattcagcagccagcggtctcttcatccag
gccattcagtcacggtgtgagaatcttgcagctcccacaactctgaagaagactttacag
tgcttggagggaatacatctcagccagtctggggctgtcttgacactgtatgttgataag
cttctgtctactccattccgtgtgcttgctcgcatggttgacacactggcttgtcgtcgg
gtagaaatgcttttggctgcaactttacagaacagcattactcagttaccagttgaagaa
ctggatagaattcaggaataccttcaaaacagtggattagcaacaaggcaccaaagactt
tactcgctcttggatagatttcgtcttatggtagcaccagacacaactagtccttcacct
ctggttacctcacacccactagatggagaagaccaaccggctttagagaatgtaattcta
gacaaagactggtatgtgtcactagtgaggtcgcagtgttgcatcaagtctgactcagca
ctgctagaaggtgcagagctggtaaataggattcctcagcctgacctgaactccttcatg
gccagcaaggaattcaacctaagcttattagcaccttgtttaagccttggtatgattgaa
atctcaagagaccagaagagtagcctctttgaaacagctcggagggtaactttggatcgt
gtgtctgccactgtacaaaaccttcctgccaaccaccaggtttttcaaccactgttgcca
actgagccatcagcctactggaaaaaactaagtgatgtctttggagatgaggtgatgtat
cagtctatgatgacactgtgtcgtgcactggctcagtatttgttgttactctcaaaacta
ccagctggtctccgtgttccttctgacaaagaggatgatatcctgaaattcgtagttatg
tcagtagaggcactatcatggcacttaatgcacgaccagattccattaagtatagatctt
caagctgctctggattgttgctgcctggcattacagcagcccagtctctggaatttgctg
gcttctgcagttaatgtgacatatgcttgctccttaattaattgcattagatttatcata
gaagcagttgcagtagaacctggtaatcaacttcttagtcctgaacgaaagaagaatact
tcaaaaggcttaagtgagggtgaagttgattcaaacacacagaaaactaaacacatcact
gcagcttgtgaaatggtagctgagatggtggaatgcttacagactgtcttggcactgggg
cacaaaagaaacagcagtatcccagcatttcttactcctgtcctcaagaacatcatcatc
agtttagcaaggctgccaatagtgaacagttacacaagagtgcctcccttggtctggaaa
ttaggctggtcaccaaagcctgcaggtgactttggcacagtttttcctgaaatcccagta
gaatttcttcaggaaaaagaaatctttaaggagttcatctatcgcattaatactcttggg
tggatcagccgtactcagtttgaagagacttgggctactttacttggtgtgcttgtaact
cagcctattgtaatggaccaggaggagaaccaacaagaggaagatacagagaggacgcaa
attaatgttcttgcagtacaagccataacttccttggtgctgagtgcaatgacaatacct
gttgcaggcaatccagcagttagctgtttggaacagcagccccgcaacaaagcgttaaaa
gctctggacacaaggtttgggagaaagttaagtgttatcaggggaattgttgaacaggaa
atccaagcaatggtatctaagagagataatattgctactcatcacttgtatcaagcttgg
gaccctgttccatcactttctcctgctactacaggtgctcttatcagccatgaaaaactc
ttactgcagatcaacactgaacgagaaataggagatatggattataaactgggacaggtc
tctatacactccatatggttaggaaataatatcactcccttgagagaagaagagtggggt
gaggatgaagaagatgagaatgacatacctgctccttcttcaccaccaacctctcctatt
aacactaggaaacaccgggctggtgtagatatacattcttgttctcagttcttgcttgaa
ctgtatagtcagtggatattgccatcaaaccccagcaagagaacgccagttattttgatt
agtgaagtggtgcgatcactgctggcagtatcagacttatttacagaaaggaatcagttt
gagatgatgtatacaacattgacagaattgcgaaaggtgcatccatcagaagatgagatt
cttgtgcagtatttgataccagccacttgtaaagctgctgctgttctaggaatggataaa
gctgtggctgaaccagtaagtcgactgctggaatcaaccctaaggagcacccatatgcca
agtcggattggagctctgcatggaattctttacatccttgagtgtgacttgcttgatgag
acagcaaagcaactgattccaattatcagcgagtatctgctctccaatttgagaggagta
gcacattgtgtgaatatccataaccaacagcacatcttggtgatgtgtgcggctgctttc
tatttgatcgagaattacccacttgatgtagggcctgaattctctgcaggaattatacag
atgtgtggagtcatggtgtctggaagtgatgaatcaacgccatccattatttatcattgt
gtcctaagaggattagaacgactccttctttcagagcaactttctaggctggatagtgaa
tcgctggttaaactgagtgttgacagagtgaatgtgcagagcccccacagagcaatggca
gcacttggattaatgctgacttgcatgtacacaggaaaggaaaaaattagccccagtcgt
accatagatgcaaatgctgctgctcccgacagtgaatctgtgatcgtagctatggaacga
gtatctgtcctttttgataggatcaggaagggatttccttttgaagctagagtagtggct
cggatccttccacagttccttgatgattttttccctccacaagatgtaatgaataaagtt
attggagaatttttatccaatcagcagccttacccgcaattcatggcaacagtggtttat
aaggtattccagacactgcatagcactggacagtcttcaatggtccgggactgggtgatg
ctgtctctctctaatttcacacaaagaacacctgtggctatggcaatgtggagtctttcc
tgtttttttgtcagtgcttccaccagtcaatggatttcagcaattcttccacatattatc
agcagaatgggaaaatctgagcaagtggatgttaacatcttctgtttggtggccatagac
ttttaccggcatcagatagatgaagaattggatcgaagagcctttcagtcggtgtttgag
gtggtagcatctccaggaaccccgtattatcacctactgacttgtttgcaaaacgtccac
aaggtcacagcgtgctga
DBGET
integrated database retrieval system
