Mesitornis unicolor (brown roatelo): 104548261
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Entry
104548261 CDS
T08455
Symbol
PKD1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1
KO
K04985
polycystin 1
Organism
mui
Mesitornis unicolor (brown roatelo)
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mui03037
]
104548261 (PKD1)
04812 Cytoskeleton proteins [BR:
mui04812
]
104548261 (PKD1)
04040 Ion channels [BR:
mui04040
]
104548261 (PKD1)
04091 Lectins [BR:
mui04091
]
104548261 (PKD1)
Cilium and associated proteins [BR:
mui03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104548261 (PKD1)
Cytoskeleton proteins [BR:
mui04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104548261 (PKD1)
Ion channels [BR:
mui04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104548261 (PKD1)
Lectins [BR:
mui04091
]
C-Type lectins
Others
104548261 (PKD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD
REJ
PKD_4
Lectin_C
LRR_8
Y_Y_Y
WSC
LRR_4
LRRCT
Motif
Other DBs
NCBI-GeneID:
104548261
NCBI-ProteinID:
XP_010192538
LinkDB
All DBs
Position
Unknown
AA seq
2897 aa
AA seq
DB search
DLSHNQIAGLDVETFESLTSLAKLDISHNKISTLEDGIFDNLFNLSEINFSWNPFVCDCK
LSWLPRWVEETRVSVIEAAETRCVHPPEVANLSLFDVLFPNATCGAQYIACLTSNHTEGA
ELIVLFTSAHNGNLTQETCGALCYAEDQEYGGFSRQGQCLCGTAHETNSSSDCLPFCTEH
LPGQACGGPSLVPLPFPASLPVSFTGLQPRYSLHQAVLFNVSIPIAVSTLLWEFGDQTEV
LNTTGNTAVHTYALPGQYNVTATVFVGTRDIDVQAEIEVVASPLQLELQCPSLVKTNESL
DIRIRNRGGTGLAVLYGITAEAGELGRAVHPMCPPDGLVFPGNNHCYQLVVEKAEWLEAQ
QHCQEHGNGELAFVSSPEIQSFLVARVIRSLDVWIGFNDLASAGAQQRGEGFNLESCQNW
LPGEPHPSNADHCVRMGPTGQCNTDLCMAKHSYVCEYKPKGVLLNDKNFFVGDPTFGTRE
AVKIVTGDVMEDVLSSPGQTEEVMVFPELAFRHEGYVTALELVTQELHRPVRVSFQLHRP
TGEGDQEGANATEPLLAAQDDGNGTLLECPPGFQWCHLTDLCSSLNNCCNATECANASLA
RAAAPVSLQHNESQLSYGLLGEFLFTIPAGPSAQYLVTLRKENIVVKAKDIFSIQHNAGV
GSFLQCQPSTTSPYRTNVFSTNSSEWVLGLSDGSGGASWMNDTVCSVRVRYAEEQLVPVM
NPGNAGLEHPGRYTVRASVDNSIFSANLSCGFWVASGVSGLRVIHPAPQGSRVYLPSNHT
TLLVKLSSGLNATARSFPSQGSSPAAVAPPAADCARETNDTWFAAVSLSGLREGVSTHVL
VAENAVSSQNITVTVKVEEPIRGLRAMPDPESRVLFLSGRCRYVPVMEAGSDVTFRWTVD
DKPSFTFYNVVFNVIYQSPAVYKLSLTASNHVSNFTVNYNVTVEMMNKMKNLTVAGVLPV
LPQNSTVELTATVQVDSAVDALFLWDFGDGVQETYLFRPPYNKSFLVPDPSVHEVVIEHN
VSHVYQDPGEYALVVLVSNQFENLTHMTPVHVHSYLVDVKMETEEDVLVVSRPVTFRAHP
LPSPYGVVYSWDFGDGSLLFTESQPTATYSYPRRGVYNVTVTANNTISSVEVVESYQVFE
EITGLRVSADEAAELGASVTLNASVQTGDSVTWVFDLGDGTVLRTQVPVVEHVYVKDINC
TVNVTAVNPVNSVSQAVPIRIFVLEVLKIEPDSCILEHPDVQLTAYVTGNPDNYVFDWTF
GDGSSNVTVRGDPVVMHNFTRSGTFPLSLTLSSSFNKAHYFTSVCVEPEIVNVTLLPSKQ
FVRLGEETSFQVSAVPLYRYRYRWDFGNNESTRSSGTEVTYTYKNTGVFLVTVTVSNNVS
FNNDTAFVEVQEPVGVAKIEYNGTSVLELNQVYLFSASMNGTKVSYCWDFGDGTTQPGQI
AAHSYNATGHYTVSVMGQNDVSFNETVVEVTVKRRLQGLTINASRTVVPLNGSGFFXAAP
PSRYSWILCDRCTSIQGSSTISYTFRSVGTFNVIVTAENKISSLQDSIYVYVLEQIEGLQ
VGSTDLVEDAYFPTNKTLHLQAVVREGTNISYSWVAQRDGAAVQSFAGKTFSLSILEAGN
YTVYLKATNMLGWATANRTVEFIESIGLLKPYAFPNPVAINASVNISATVSSGTGITYVW
YLEDGFSPVTSEPFIIHSFQSPGVTEVVIGAENKLDATNTTIYICVEEVIEGLSIGTAEL
DCRYVSSGSTVVFEGELQRGTEVTWLWEVPNSTLTGQAVAVTFPTAGLYTVHLNASNAIS
WALASRNISVLDRIQGLEVRASRKVVEPGEQVTFVIRMLSGTSVSYLVSISGDYSVVLNG
SRYTHEFTKSGDYLVTVTVQNQISIAHAQVLISVLEAIRDVRLLNCCEKGMPTGTEKTFS
AQAGSGSRVSFSWHFSLWKERGRSVVTVVGETVSYTPEAAGLLEIHLSAFNDLGGINVTR
TIQVQDPIAQVSLTASNAFVNRTALFEAAVVPSSRSIEFLWTFGDGSSTQTTRVAAANYS
YLSPGDYLVEVNATNLISFFIAHLTVTVKVLECEEPEVELALPPQVVMKRSQRNYLEAQI
DLRGCIKYQTEHLWEIYRAPSCTSLDDSSRIRLPNVDVNRPQLVIPKLALEVGNYCFIFI
VSFGDTPLSKSIFANVTVIPSKLVPIIDGGSYRVWSNTQDLILDGEKSYDPNLDDGEQTP
LLYEWSCTFSSKSSAAGCSLHFSAKEGIVTISKAVLEADVEYTFDLTVRKEGMSPEATNQ
TVFIKRGGVPIVSLECVSCKAQSVYEVSKSSYVYLEGTCQNCHNDSRIGRWAAHSFKNKS
LVLDKTTTSTGDTGMNLVLRQGALRDGEGYTFTLHITDLSTGEEGFASIDLLPNQPPVGG
SCRLSPKGPLRALMAKVHFECAGWRDTEDAQGPLVYILLASRHRDGHYHEFCVYKGSRAE
HSAFLPPGFHDSGFVVSVSVLVQDQLGATVVAINRSMEIGLPEGFPSLSHWLYNQTDTVL
QGLVKQGDPQQVIEYSLALITILNEYERSMLLEPETGNEFELRTWTRNNITETLNSLKVN
TVDDIQQISAALAQCTVVSKELVCKSCLTRTLNKLETMMNILQGEMTQGTVTPTGIADNI
LNITGDLIHLVNTVSQESKPQELLSDSHNLLLAPKAYNLSSSLMRILMKSRVLNEEPLEL
VGGEIKATGKRTDPFNLLCYENTPNCQFSIPQAFNTTLSNLTDVIQVMFQVDSNPFPFGY
ISNYTVSTKVASMEFQTHNGVQIPIGSLDSEKAITVMVSNNTDADDLSAGTKIVEARSSV
NLIVTMESNNREAGLHFQLTYRVLNDHYLASEPEPFIMAYLHHEPEPNEHNCSASKKIGL
DALAGTDHKLYTFFTSP
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
ggatctctcccataaccagatcgctggtttagatgttgagacgttcgagagcctgacttc
tctggcaaaactagatataagccacaacaagatttctacattagaagatggaatatttga
taatttatttaatttaagtgaaataaacttcagttggaatccattcgtttgtgactgcaa
actctcctggttgccccgatgggtggaagagacaagagtgagcgttattgaggcggcgga
gacgagatgcgtgcaccctcccgaggtggcaaacctctccctcttcgatgtcctgttccc
caatgccacttgtggagctcagtacatcgcgtgtctgaccagcaaccacacagaaggggc
tgagctcatcgtcctcttcacgtctgctcacaatgggaacctcacccaggagacctgcgg
ggccctgtgttacgccgaggaccaggaatatggaggtttcagccgccagggacagtgttt
gtgtggcactgcccacgaaacgaactcttcctccgattgtttgcccttttgcactgagca
tttgcccgggcaggcctgtggtggcccatcactcgtccccttgcccttcccggcatcgct
gcctgtgtccttcacgggactgcagccccggtacagcctgcaccaggccgtgctcttcaa
cgtcagtattcccattgccgtcagcactttactgtgggaatttggggaccagacagaggt
tctcaacaccactggaaacacagctgtccacacgtatgccttacctgggcagtacaacgt
caccgccaccgtcttcgtgggcaccagggacatagacgtgcaggcagagattgaggtggt
ggcttcgcccctgcagttggagctgcagtgtccttccttggtcaagacgaacgagagtct
ggacatacggatccgcaacagaggcggcactgggctggcggtgctgtacggtatcaccgc
tgaggccggggagctgggcagagcggttcaccccatgtgtcctcccgatggcctggtgtt
cccgggcaacaaccactgctaccagctggtggtggagaaggccgagtggctggaggccca
gcagcactgccaggagcacggcaatggagagctagcgtttgtgagcagccccgagatcca
gagcttcctggtcgcccgagtcatcaggagcctggatgtctggatcggcttcaacgattt
agcgagcgctggcgcccagcagagaggagaaggctttaacctggagagctgtcagaactg
gctgccaggagagccccatccctccaacgccgaccactgcgtccggatgggcccgacggg
ccagtgcaacaccgacctgtgcatggccaagcacagctacgtctgcgagtacaagccaaa
aggagtcctcctaaatgacaaaaacttctttgtgggagaccccacgttcgggacacgcga
ggctgtgaaaattgtgacgggagatgtgatggaggatgtgctgtcatctccgggacaaac
tgaggaggtgatggtgttccctgagctggcgttcaggcacgaggggtacgtgactgccct
ggagctggtgacgcaggagctgcatcggcccgtccgagtgagcttccagctgcacagacc
gactggtgaaggcgaccaggagggagcaaacgctacagagccattgctcgctgctcagga
cgatgggaacgggacgctccttgaatgtccccctggtttccagtggtgccatttgactga
tctgtgctcatcgctcaacaactgctgcaacgcgaccgagtgtgccaacgcttctcttgc
ccgcgccgctgcccccgtgtccctgcagcacaacgaaagccagctcagctatggactcct
cggggagtttctctttacgataccagcgggcccctctgcccagtatctggtcacactgag
aaaagaaaatattgttgtcaaggccaaggacatcttcagtatccagcacaacgcgggcgt
gggctcgttcctgcagtgccagcccagtaccacgtccccatacagaaccaacgtcttcag
caccaactcctcagagtgggtgctcggcctctccgacggctccggcggtgcctcctggat
gaacgacactgtttgctccgttcgggtccgttacgctgaggagcagctggtcccggtgat
gaaccctggcaacgcggggctggagcatccgggtcgctacacggtcagagccagcgtgga
caacagcatcttcagcgccaacctgtcctgcggtttctgggtggcctccggggtgtcagg
cctgcgcgtgatccaccctgctcctcaaggcagcagggtctacctcccgtccaaccacac
caccctgctggtcaagctgtcctcggggctgaacgccaccgctcgctccttcccctccca
gggctcctccccagcggctgtcgccccgccggcggccgactgtgccagggagaccaacga
cacctggtttgctgcggtcagcctgagcggcctccgggagggggtcagcacccacgtcct
cgtcgcggagaacgccgtcagctcccaaaacatcaccgtcaccgtgaaagtggaggagcc
catccgcgggctgcgggccatgcctgaccccgagagcagggtcctttttttgagtggtcg
ctgccgctacgtccctgtgatggaagctgggtcagacgtgactttccgatggacggtaga
tgataagccatcgttcactttttacaatgttgtcttcaacgttatctaccaaagcccagc
tgtgtacaagctttcgctcaccgcctccaaccacgtcagcaacttcacggtcaactacaa
cgtcacggtggagatgatgaataagatgaagaacctgacggtggcgggcgtcctgccggt
cctgcctcagaacagcaccgtggagcttacagcgacagtgcaggtcgattcagctgtgga
tgctttgttcctgtgggattttggagacggtgtccaggagacgtacctgttcagaccccc
ctacaacaagtccttcctcgtccctgaccccagcgtccatgaggttgtcattgagcacaa
cgtttcacacgtctatcaggacccaggagaatacgccttggtggttctggtgtcaaacca
gtttgagaacctcacccacatgaccccggttcacgtccacagttacctggttgatgtgaa
gatggaaaccgaggaggatgtgttagttgtgagccgtccggtcaccttcagagcccatcc
gttgccgtctccgtacggcgtggtgtacagctgggactttggggacgggtccttgctgtt
cacagagagccagcctacagcgacgtacagctacccccgaagaggggtgtacaacgtcac
cgtgacggccaacaacaccataagcagcgtggaggtggtcgagagctaccaggtgtttga
agagataacggggctccgtgtctccgcagatgaggcagcagagctgggagcatccgtgac
ccttaacgcttcggtgcagacgggggacagcgtcacctgggtgttcgatctgggggacgg
gacggtgctgaggactcaggtgccggtggtagagcacgtgtacgtaaaggacatcaactg
caccgtgaacgtgaccgctgtgaatcctgtcaactccgtctcccaggctgtacccatccg
gatatttgtgctggaggtgctcaaaatagagcccgactcctgcatccttgagcacccgga
tgtgcagctcaccgcgtatgtgaccgggaatcccgacaactacgtctttgattggacttt
tggagacggctcctccaacgtcacggtcaggggggaccccgtggtgatgcacaacttcac
ccgaagtgggacgttccccctctcgctgactctctcaagcagctttaacaaggctcacta
tttcaccagcgtctgtgtggagccagagatcgtcaacgtcaccctcctcccttccaagca
gtttgtgaggcttggagaagagaccagcttccaggtcagcgccgtgcctctctaccggta
ccgctaccgctgggatttcgggaacaacgagtccactaggtcgagcgggacggaagtgac
ctacacctacaagaacacgggggtcttcctggtcacggtaactgtgtccaacaacgtctc
tttcaacaacgacacggcgtttgtggaagtccaggagccggttggggtagcaaagattga
atacaacgggacgagtgttttggagctgaaccaggtgtacctgttctctgccagcatgaa
cgggaccaaggtgagttactgctgggacttcggagacggcaccacgcagcctggccagat
cgctgcccactcctacaacgccacgggccactacacagttagcgtgatgggccaaaacga
cgtgagctttaatgagactgtcgtcgaggtgacggtcaagcgtcggctgcaggggctgac
catcaacgccagcaggacggtggtgccgttgaacggctcgggtttttttngcgctgcccc
ccccagccgctactcgtggatcctctgtgaccgctgcacctccatccaaggctcctccac
catttcctacactttccgctccgtgggcacgttcaacgtcatcgtgacggcggagaacaa
gatcagctccttgcaggacagcatctacgtctacgtcctggagcagattgaagggctgca
ggtgggcagcactgacctggtggaggacgcctatttccccactaacaaaacgctccactt
gcaggcagtggtgagggaggggacaaacatctcctacagctgggtcgcccaaagggacgg
cgccgctgtgcagagcttcgccgggaaaaccttctccttgagcatcctggaagctggaaa
ctacactgtctatctgaaagccaccaatatgctggggtgggcaactgctaacaggacagt
ggagttcattgagagcattggtcttttaaagccttacgccttccccaacccagtcgctat
taacgcctctgttaacataagcgccaccgtcagcagtggcactggcatcacctatgtgtg
gtacctagaggacggcttctctcctgttacctctgagccctttatcatacactccttcca
gagccccggggtgacagaggtcgtcatcggggcagaaaacaagctggatgccaccaacac
aaccatttacatctgcgtggaggaggtcatcgaggggctgagcatagggacagcggagct
ggactgcaggtacgtctcgtcaggctccactgtggtctttgagggggagctgcagagagg
gaccgaagtgacgtggctttgggaggtccccaacagcacgttgacggggcaggccgtggc
ggtcacgttccccaccgcggggctgtacacggtccacctgaacgcgtccaacgccatcag
ctgggcgctggccagcaggaacatctcggtgctggacaggattcaggggctggaggtgcg
cgccagcaggaaggtggtggagccgggagagcaggtcacctttgtcatcaggatgctgtc
gggcacctccgtgagttacttggtcagcataagcggggactactccgtggtgctcaacgg
gtccaggtacacgcacgagttcaccaagagcggcgattatttggtgacggtgacggtgca
gaaccagatcagcatcgcgcacgcccaggtgctcatctctgtgctggaggccatccgtga
cgtccggctcctgaactgctgcgagaagggcatgcccacgggcacggagaaaaccttcag
cgcccaggcgggcagcggctcccgtgtgtccttctcctggcacttctccctgtggaaaga
gcgaggccggtctgtggtcacggtggtgggagagacggtttcctacactccagaggctgc
agggctgctcgagattcacctcagcgccttcaacgacctgggaggtatcaacgtcaccag
aaccatccaggtgcaggacccgatagcccaggtgtccctcactgcctccaacgccttcgt
caacaggacggcgctgtttgaagcggcagtggtgcccagcagccggagcattgagttctt
gtggacctttggggatggctcttccactcaaacgaccagggttgcggcagccaactattc
ttacctgagccctggggactacctggtggaggtgaatgccaccaacctcatcagcttctt
catagcccacctcaccgtcaccgtcaaagtcctggagtgcgaggagccggaggtggagtt
agccttgcccccgcaggtcgtcatgaagcggtcccagaggaactacctggaggcacagat
cgacctccgggggtgcatcaagtaccagacagagcacctatgggagatctaccgagcacc
cagctgcacgagcctggacgactccagcaggatccgcctgcctaacgttgacgtgaacag
gccccagctggtgatacccaagcttgccctggaggttggcaactactgcttcatcttcat
cgtctcctttggagacacccccctgtccaaaagcatctttgccaatgtgactgtgatccc
gagtaagctggtgcccatcattgatggggggtcgtaccgtgtatggtccaacacccagga
cttaatcttggatggggagaaatcctacgacccgaacttggatgacggggaacagactcc
gttgttgtacgaatggtcttgtaccttttcctccaagagctcggctgcagggtgctctct
gcatttcagtgccaaggaaggaattgtcacaatttccaaagctgtcttagaagcagatgt
ggagtacacgttcgacctgaccgtcaggaaggagggcatgagtcccgaggccaccaacca
aaccgtgttcatcaagagggggggagtccccatcgtgtccctggagtgcgtttcctgcaa
ggctcagtctgtctacgaagtgagcaagagctcctacgtctacctggaggggacctgcca
gaactgccacaacgactccagaattgggagatgggcagcgcacagctttaagaacaaatc
cctcgtcctggacaagacgacgacgtccacgggcgacacgggcatgaacctggtgctgcg
gcagggggctctgagggacggcgagggctacaccttcaccctgcacatcacggacctcag
caccggggaggagggcttcgcctccatcgacctgctcccgaaccagccgcccgtcggggg
gtcctgccgcctgtctccaaaagggcccctcagggcgctgatggccaaggtgcactttga
gtgcgcaggctggcgtgacacggaggacgcgcagggcccgctggtctacatcctgctggc
ctctcgccacagggacggtcactaccacgagttctgcgtctacaagggcagccgcgccga
gcacagcgccttcctgccccccggcttccacgacagcggcttcgtggtgtccgtgtctgt
ccttgtccaggaccagctgggagccaccgtggtggccattaaccgctccatggagatcgg
cctgcccgagggcttccccagcctctcccactggctctacaaccaaaccgacactgtgct
gcagggcttggtgaaacaaggggaccctcagcaagtcatcgagtactcgctggccctcat
caccatcctgaacgagtacgagcggtccatgcttctggaacccgagaccgggaatgagtt
tgagctccggacctggactcgcaacaacatcacagaaaccctgaactcgctgaaggtgaa
cacggtcgatgacatccagcagatctcggctgccctggcgcagtgcacggtggtgagcaa
ggagctggtgtgcaagtcgtgcctgacgaggaccttgaacaaactggagaccatgatgaa
catcctgcaaggggagatgacccagggcaccgtgacgccgaccggcatcgccgacaacat
cctcaacatcaccggggacctcattcacctggtcaatacggtttcccaagagtccaagcc
ccaggagctgctttccgattcccacaacctgctgctcgctcccaaagcctacaacctgtc
ctccagcctgatgcgcatcctcatgaagtcccgagtgctgaacgaagagccccttgagct
ggtgggaggggagatcaaggccacgggcaagcggaccgatcccttcaacttgctgtgcta
cgaaaacacgccgaactgccagttctccatcccccaggcgttcaacaccaccctgtccaa
cctgacggatgtcattcaggtcatgttccaagtggactccaaccctttcccgttcggcta
catcagcaactacaccgtgtccacaaaggtcgcctccatggagtttcagacgcacaacgg
ggtgcagatccctattgggagcctggactcggagaaagccatcaccgtgatggtgtcgaa
caacacggatgccgacgacctgtccgctggcaccaaaatcgtcgaggcgagatcgtctgt
gaacctgatcgtcaccatggagagcaacaacagagaagcaggactgcacttccagctcac
ctacagagtcctgaacgatcactacctcgcgagcgagcctgagccgttcatcatggctta
tctccaccacgagccagagcccaacgagcacaactgcagcgcctccaagaaaatcggcct
ggacgccctggctgggactgaccacaagctctacaccttcttcacctcccccag
DBGET
integrated database retrieval system
