Mycobacterium ulcerans: MUL_3945
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Entry
MUL_3945 CDS
T00435
Symbol
alkA
Name
(GenBank) Ada regulatory protein AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mul
Mycobacterium ulcerans
Pathway
mul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUL_3945 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mul03000
]
MUL_3945 (alkA)
03400 DNA repair and recombination proteins [BR:
mul03400
]
MUL_3945 (alkA)
Enzymes [BR:
mul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MUL_3945 (alkA)
Transcription factors [BR:
mul03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MUL_3945 (alkA)
DNA repair and recombination proteins [BR:
mul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MUL_3945 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABL06013
Pasteur:
MUL_3945
UniProt:
A0PUJ4
LinkDB
All DBs
Position
4407773..4409260
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AA seq
495 aa
AA seq
DB search
MHEDFERCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCPVRPPFARNVRFLPTAAAAQRE
GFRACKRCRPDASPGSPEWNMRGDIVARAMRLVADGTVDREGVTGLAARLGYTTRQLERL
LQAEVGAGPLALARAQRMQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTIRLVCDSTPT
ALRRHAAARFGAPATSPGTVSLRLPVRTPFAYQGVFGHLAAGAVPGCEEVRDGAYRRTLR
LSSGNGIVTLTPAPDHVRCLLVLDDFRDLAAATARCRRLLDLGADPEAVVEALSGDPALS
PVVATAPGQRIPRTVDEAELAVRAVLAQQVSTKAARTHAARLVTAYGRPIHDQGGTLTHT
FPSVQDLAEIDPIHLVVPKTRQRTLSMMVDAIADRRVNLDAGFDWTRAREQLLDIPGVGP
WTAEVIAMRGLGDPDAFPVADLGVRLAAKQLGLPQRQPDLLDRSARWRPWRSYATQHLWT
TLEHSVNDWPPREVA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgaagacttcgaacgctgctatcgggcggtccaatccaaggacgcccggtttgac
ggctggttcgtgaccgcggtgctgaccacccggatctactgccggccgagttgccccgtt
cgcccaccgttcgcccgcaacgtgcggtttcttccaacagccgcggcagctcaacgtgag
ggcttccgggcctgcaaacgttgccgccctgacgcgtcaccgggttcgccggaatggaac
atgcgcggcgacatcgtcgccagggcgatgcggttggttgccgacggcaccgtggaccgc
gaaggtgtcaccgggcttgccgcgcgtctgggctacaccacacgccagctggaacgcctg
ctgcaggctgaggtcggcgccggccccctcgcgctggcccgcgcccaacggatgcagacc
gcacgggtgctgatcgagaccaccgatctgcccttcggcgacgtggcgtttgcggccggg
ttctccagtatccggcagttcaatgacaccatccgcctggtttgcgacagcacaccaacg
gcgttgcgtcgacacgctgccgcgcggttcggcgcacccgccacctcgccgggaacggta
tccctgcgcctgccggtgcgaaccccctttgcctaccagggtgtcttcggccacctcgcc
gccggggccgtgccgggttgtgaggaggtccgtgatggtgcctatcgacgcacgctgcga
ctgtcgtccggcaatggcatcgtcacgctgacacccgcgcccgaccacgtccggtgtcta
ctggtgctcgacgatttccgcgacctcgcggccgccacggccagatgccggcgcctgctc
gatcttggtgccgacccggaggctgttgtggaggccctcagtggcgaccccgctctgagc
ccggtagtggccacggcacctgggcagcgcataccccgcaccgtggacgaggcagaactc
gccgtgcgcgccgtgctcgcacaacaggtgtcgaccaaggctgcgcgtacccacgcggcc
cgcctggtcaccgcctacggccgacccatccacgatcaaggcggaaccttgactcatacc
ttcccgtcggtgcaggacctggccgaaatcgacccaatccatctggtcgtccccaagacc
cgacagcgcaccttgagcatgatggtcgacgccatcgccgaccgaagggtgaacctggac
gccggattcgactggactcgggcgcgagagcagctgctcgatatccccggagtcggcccg
tggaccgcggaagtcattgccatgcgcgggctgggcgacccggacgcgtttccggtcgca
gaccttggcgtccggctggccgcgaaacagttgggcctgccccagcgtcaaccggatcta
ctggaccgcagtgcgcgctggcgtccctggcgttcgtatgcaacccaacacctttggacc
acactcgagcattcggtaaacgattggccaccacgggaggttgcatga
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