Mycobacterium ulcerans: MUL_4723
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Entry
MUL_4723 CDS
T00435
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase II UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mul
Mycobacterium ulcerans
Pathway
mul03420
Nucleotide excision repair
mul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUL_4723 (uvrD1)
03430 Mismatch repair
MUL_4723 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mul03400
]
MUL_4723 (uvrD1)
Enzymes [BR:
mul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUL_4723 (uvrD1)
DNA repair and recombination proteins [BR:
mul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUL_4723 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MUL_4723 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DUF3013
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABL06653
Pasteur:
MUL_4723
UniProt:
A0PWD4
LinkDB
All DBs
Position
complement(5231960..5234269)
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AA seq
769 aa
AA seq
DB search
MTVQATDADQLVEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAARGVGVG
QILAITFTNKAAAEVRERVVSLVGGRAKYMWVSTFHSTCVRILRNQAALIKGLNSNFSIY
DADDSRRLLQMIGRDMGLDIKRYSPRLLTNAISNLKNELIDPDRAVSDLSEDSDDLARTV
ASVYAEYQRRLRAANALDFDDLIGETVGILQAFPDIAGHYRRRFRHVLVDEYQDTNHAQY
VLVRELVGRGSEDEPGDVPPAQLCVVGDADQSIYAFRGATIRNIEDFERDYPDATTILLE
QNYRSTQNILSAANSVISRNSGRREKRLWTDAGAGELIVGYVADNEHDEARFVAEEIDAL
AERDEITYSDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLD
NPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGAGFSDALVAAAEGKVPMLNSRAEKA
IAGFVELLDELRGRLDSSEGDVGELVEAVLERTGYRRELESSTDPQELARLDNLNELVSV
AHEFSTDLANAAEPEPDAEDVPDTGMLAAFLERVSLVADTDDIPEHGAGVVTLMTLHTAK
GLEFPVVFVTGWEDGMFPHMRALDDPTELSEERRLAYVGITRARQRLYLSRAIVRSSWGQ
PMLNPESRFLREIPQELLNWRRLAPKPSFSAPVSGAGRFGTARSAPVRTSTSKRPLLVLQ
PGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVAKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcaagcgaccgatgccgaccaactcgtggaaggtctcaacccacaacagcgc
caggccgtggtgcacgaaggctcgccgctgctgattgtcgcgggcgcgggctcgggcaag
acggcggtgctgaccaggcggatcgcctacctgatcgcggcccgcggtgttggggtcggt
cagatcctggccatcaccttcaccaacaaggccgccgccgaggtgcgggagcgggtggtg
agcctggtcggcggccgggccaagtacatgtgggtgtccaccttccactcgacctgcgtg
cgcatcctgcgcaaccaggcggcgctgatcaagggcctcaactcgaacttctcgatctat
gacgcagacgattcacggcggctgctgcagatgatcgggcgcgatatgggcttggacatc
aagcgatactcgccgcgcttgctgaccaatgccatctccaatctgaaaaacgaattgatc
gacccggatcgggcggtgtcggatctgtcggaggattccgatgacttggcgcgcaccgtc
gcatcggtctacgcggaatatcagcgccgcctgcgggccgccaatgcgctggactttgac
gatctcatcggcgagacggtgggcattctgcaagcttttcccgacatcgccgggcactat
cggcgccggtttcggcacgttctggtcgacgaataccaagacaccaaccacgcgcaatac
gtcctggtgcgggaactggttggtcgcggcagcgaagacgagcccggggacgtgcccccg
gcgcagttgtgcgtagtcggcgacgccgatcagtcgatctatgcgtttcgcggcgccacc
attcgcaacatcgaagacttcgaacgcgactatcccgatgccacaacgattctgctggaa
cagaattaccgctcgacacagaacatcctgtcggcggccaactcggtgatctcgcgcaac
tccggacgtcgcgagaagcggctgtggaccgatgctggcgcgggggagttgatcgtcggc
tacgtcgccgacaacgaacacgacgaggcgaggttcgtcgccgaagagatcgacgcactg
gccgagcgggacgagatcacctacagcgacgtcgcggtcttctatcgcaccaacaattcg
tcgcggtcgctggaagaggtgttcatccgcgccggcattccctacaaggtcgtcggcggc
gtgcgcttctacgagcgcaaggagattcgtgacatcgtcgcctacctgcgggtgctggac
aaccccggcgatgcggtcagcatgcggcgcatcctcaacacgccgcgccgcggcatcggc
gatcgtgccgaggcctgtgtggcggtgtacgcggagaacaccggcgccggcttctccgac
gctctggtggccgccgccgagggcaaggtgccgatgctcaatagccgtgcggagaaggcg
atcgcgggctttgtcgagttgctcgacgagttgcgaggacgcctcgactcatccgagggg
gatgtcggtgagttggtggaggcggtgctggaacgcaccggataccgccgcgaactggag
tcctccaccgatccgcaggagctggcccggctggacaacctcaacgaactcgtcagcgtt
gcccacgaattcagcaccgacctggcaaatgccgccgagcccgaaccggatgccgaggat
gtgccggacaccggcatgctggcggcctttctggaacgggtgtcgctggtcgccgacacc
gacgatattcccgagcatggcgcgggcgtggtcaccctgatgaccctgcacaccgccaaa
ggtctggagttcccggtggtgttcgtgaccgggtgggaggacgggatgttcccgcacatg
cgggcactggatgatccgaccgaactctccgaagaacggcgactggcctacgtcggcatc
acccgggcccggcaacggctctacctgagtagggccatcgtccggtcttcctgggggcag
ccgatgctcaaccccgaatcccggttcctgcgggagatacctcaggaactcctcaactgg
cgccgtcttgcgcccaagccgtcgttcagcgcgcctgtgagtggagccggccggtttggc
actgcgcggtcagcacccgtccgcacgagcacgagcaagcggccgctgttggtgctgcag
cccggcgatcgcgtcacacacgacaagtacggtctgggccgcgtcgaggaagtatccggt
gtcggcgaatcggcgatgtcgctgatcgacttcggtagctcgggacgggtgaagctgatg
cataaccacgccccggtcgccaagctttag
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