Pseudoduganella umbonata: FCL38_00005
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Entry
FCL38_00005 CDS
T06138
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_00005 (radA)
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FCL38_00005 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
GvpD_P-loop
AAA_24
ChlI
SLFN-g3_helicase
AAA_16
Lon_C
AAA_14
AAA
nSTAND3
Rad51
RecA_N
nSTAND_NTPase5
CobU
AAA_5
NTPase_1
ATPase_2
TniB
zf-RING_10
RPW8
Zn_Ribbon_Topo
AAA_29
PAXNEB
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
QCP08995
UniProt:
A0A4P8HLG2
LinkDB
All DBs
Position
join(7425802..7426165,1..1010)
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AA seq
457 aa
AA seq
DB search
MAKAKTQYVCSECGGTSSKWTGQCPACRQWNTMVESVIETGGVNRMSQSHQALAQTAPVL
SLSEIEALDVPRFGTGIEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLSLLKS
VLYVSGEESGAQIALRAKRLAIDAKDFKLQAEIQLEKILQTLDTVKPQVAVIDSIQTLYS
DALTSAPGSVAQVRECAAQLTRVAKQTGVTIILVGHVTKEGALAGPRVLEHIVDSVLYFE
GDTHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDNQVPGSCVMVTQ
EGTRPLLVEIQALVDASHLPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGFVVFGEVGLAGEIRPAPRGQERLREAAKLGF
SIAMIPKANAPKQPIEGMTIIGVDRIDDAFTRLRELQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaagacccagtatgtgtgcagcgaatgcggcggcaccagcagcaagtgg
accggccagtgcccggcctgccggcagtggaacacgatggtggaatcggtgatcgagacc
ggcggcgtgaaccgcatgtcgcaatcgcaccaggcgctggcgcagaccgcgccggtgctg
tcgctgagcgagatcgaggcgctcgacgtgccgcgcttcggcaccggcatcgaggaattc
gaccgcgtgctgggcggcggcctggtggccggcggcgtggtgctgatcggcggcgatccc
ggcatcggcaagtcgacattgctattgcaggcgctggccaacctgtcgctgttgaagagc
gtgctgtacgtatcgggcgaggagtccggcgcgcagatcgccttgcgcgccaagcggctg
gcgatcgacgcgaaggacttcaagctgcaggccgagatccagctggaaaagatcctgcag
acgctggacaccgtcaagccgcaggtggccgtgatcgactcgatccagacgctgtattcg
gatgcgctcacgtccgcgcccggttcggtggcgcaggtgcgcgaatgcgcggcccagctg
acgcgcgtggccaagcagaccggcgtgacgatcatcctggtgggccacgtgacgaaggaa
ggtgcgctggccggcccacgcgtgctcgaacacatcgtcgattcggtactgtatttcgag
ggcgacacccattccagtttccggctggtgcgggcgatcaagaaccgctttggcgccgtc
aacgagctgggcgtgttcgcgatgacggaaaagggcctgaaaggggtgtcgaatccttcc
gcgctgttcctgtcgcagcacgacaaccaggtgcccggttcgtgcgtgatggtgacgcag
gaaggcacgcggccgctgctggtggaaatccaggcgctggtcgatgcgagccacctgccc
aatgcgcgccgcctgtcggtgggcctggaacagaaccgcctggccatgctgctggcggtg
ctgcaccggcatgccggcattgccgcgttcgaccaggacgtgttcatcaacgcggtcggc
ggtgtgaagatcaccgaaccggcggccgacctggccgtgctgctggcgattaattcgtcg
atgcgcaacaagccgctgccgcgcggtttcgtggtgttcggcgaagtgggcctggccggc
gagatccgtcccgcgccgcgcgggcaggagcgcttgcgcgaagcggccaagctgggcttt
tcgatcgccatgatccccaaggccaacgcgccgaaacagccgatcgagggcatgacgatc
atcggcgtggaccgcatcgacgatgcgtttacgcgcctgcgcgagctgcagtga
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