KEGG   Pseudoduganella umbonata: FCL38_00390
Entry
FCL38_00390       CDS       T06138                                 
Name
(GenBank) hypothetical protein
  KO
K12072  conjugative transfer pilus assembly protein TraH
Organism
mum  Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:mum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mum02044]
    FCL38_00390
Secretion system [BR:mum02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   FCL38_00390
SSDB
Motif
Pfam: TraH TxDE DUF499
Other DBs
NCBI-ProteinID: QCP09062
LinkDB
Position
complement(81517..82914)
AA seq 465 aa
MRRIPAPHAIAMALVVALPAHAGDGGMQQLFDDIGAYGNATGPGAYRAQGVNILSGGSLF
MRVPQRNQPIAQMQLPSLRLGCGGIDLYAGSFSFISKDALVSLMKNIGSSAVAYAFKLAL
DSISPQINKTLTELQQVAQDMNAMNINSCEASEALARGMTGDWQRTAQYFAKVAGPVTGM
FSDHSEARAATQADNAKVNQVVNAVSDPAQKAYLQPGNVGWRALDKLAGLDVDDRQLLMS
LSGTVVIPREQPADVAPAYYPPKAITVQQFIRGNQDGKLPVYTCTDGTGADACLQLADGE
LATTPFAKKVGAKLQAIAAKFRNNERLTSDEISFINVTALPVYKALAVSTALPNVGLDAV
WIGKYADLIAAEYAYQYIILATQQLRHAYSQAAAAAPAPAQDELRHMIASVDRVRTDARE
ELRTAYGKAESAMRIADEILFMERTLMANLPANLAGNLRFAAGGR
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcgccgtattcccgcccctcacgcaatagcgatggccctcgtcgtcgccctgcccgcc
catgccggcgacggcggcatgcagcagctgttcgacgacatcggcgcctatggcaatgcc
accggcccgggcgcctaccgcgcccagggcgtcaacatcctgtcgggcggtagcctgttc
atgcgcgtgccgcaacgcaaccagccgatcgcgcagatgcagctgcccagcctgcgcctg
ggctgtggcggcatcgacctgtacgccggatcgttctcgttcatctccaaggacgcgctg
gtcagcttgatgaaaaacatcggttccagcgccgtcgcgtatgccttcaaacttgccctg
gactcgatctcgccgcagatcaacaagacgctgacggaactgcagcaggtcgcgcaggac
atgaacgccatgaacatcaattcctgcgaagccagcgaggcgctggcccgcggcatgacg
ggcgactggcagcgcaccgcgcagtacttcgccaaggtcgccggtcccgtgaccggcatg
ttcagcgaccacagcgaagcgcgcgccgccacccaggccgacaacgccaaggtcaaccag
gtggtcaatgccgtcagcgatccggcacagaaagcgtatctccagccgggcaatgtcggc
tggcgcgccctcgacaagcttgccggcctggacgtggacgaccgccagttactgatgtcg
ctatccggtaccgtcgtcatcccgcgcgagcagcctgccgacgtcgctcccgcctactat
ccgccgaaagcgatcacggtacagcaattcatccgcggcaaccaggacggcaagctgccc
gtctacacgtgcacggacggtacgggcgcagacgcctgcttgcagcttgccgacggcgag
ttggcgaccaccccgttcgccaaaaaggtgggagccaagctgcaggcgatcgcggcgaaa
ttccgcaacaacgagcggctgactagcgacgagatttcgttcatcaacgtcacggccctg
ccggtttacaaggccctggccgtgtcgaccgcgctgccgaatgtcggcctcgacgccgtc
tggatcggcaagtacgccgacctgatcgcggcggagtacgcctaccagtacatcatcctc
gccacccagcagttgcgccacgcttactcgcaggccgctgccgccgcccccgcccccgcg
caggacgaactgcggcacatgattgccagtgtcgaccgcgtgcggaccgatgcgcgcgaa
gaactgcgcaccgcctatggcaaggccgagtcggcgatgcggatcgccgacgaaatcctc
ttcatggaacgcacgctgatggcgaacctacccgcaaacctggccggcaacctccgcttc
gccgccggagggcgctga

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