Pseudoduganella umbonata: FCL38_01685
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Entry
FCL38_01685 CDS
T06138
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
mum02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_01685
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FCL38_01685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mum02035
]
FCL38_01685
Bacterial motility proteins [BR:
mum02035
]
Flagellar system
Chemotaxis proteins
MCPs
FCL38_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
Alanine_zipper
DUF948
Motif
Other DBs
NCBI-ProteinID:
QCP09287
LinkDB
All DBs
Position
complement(399244..400830)
Genome browser
AA seq
528 aa
AA seq
DB search
MPMIIRASIGTRLTLAFGIIVLVLAGITLLSISRQSSLYDDIDLVVRDRYSKVVLGTRAL
DGIQEAATTMRSLLIADDPAQLQAERARLKARDAEATATLRDFESRITTDKGRAGMKAVM
AARERYEADQARFLALLADGNKPEATQLLLGPLSVSHGTYMDLVHNMNRLGGELMEKSAV
QAGQTYASGRTLTLVLAGAGLAFAAAMAYWLRRSITLPLREAVDIANTIAAGNLSRRIVA
GSDDETGQLLRALATMSESLGGIVRDVRANADAISGSAGDIAHSSHDLSGRTEQQASSLE
ETASSMEELTSTVRQSADNAQEASRIARKAAEVAAQGSAEVAQVVERMGDISASSRRIGD
ITGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKALIEE
SAGKVEAGNRYAGEAGRTMSAVLAEIERVSALMVEIGNTSREQSDGIDQVNQAVIAMDQV
TQQNAALVEQAAHGAEAMQQRTRDLLAAVGRFSVEDEQPARRLALAAI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgattatccgcgcctccatcggtacccgcctcacgctggctttcggcatcatc
gtgctggtcctcgccggcatcacgctgctgagcatttcgcgccagtcgtccctatacgac
gatatcgacctggtggtccgcgaccgctattcgaaagtggtattgggcacgcgcgcactg
gacggcatccaggaagcggctacgacgatgcgcagcctgctgatcgccgacgatcccgcg
caactgcaggccgagcgcgcccgcctgaaggcgcgcgatgcggaagccacggcaacgctg
cgcgatttcgagagccggatcaccacggacaagggccgggccggcatgaaggccgtcatg
gcggcgcgcgagcgctacgaggcggaccaggcgcgcttcctcgcactgctggcggacggc
aacaagccggaagcgacgcaactgctgctcgggccactgtccgtcagccacggaacctac
atggacctggtacacaatatgaaccgcctcggcggcgaactgatggaaaagagcgccgtg
caggccgggcagacctatgccagcggccgcacgctgacgctggtgctggccggcgccggg
ctggccttcgccgcggcgatggcgtactggctgcgccgcagcatcacgctgccgctgcgc
gaggctgtcgacatcgccaacacaatcgccgcgggcaacctgtcgcgacgcatcgtcgcc
ggttccgacgatgaaacgggccagctgctgcgcgcgctggccacgatgagcgagagcctc
ggtggcatcgtgcgcgatgtacgcgccaatgccgatgcgatctccggctcggcaggcgac
atcgcccacagctcgcacgacctgtcgggccgcaccgaacaacaggccagctctctggaa
gaaacggcatcgtcgatggaagaactgaccagcaccgtgcgccagagcgcggacaatgcc
caggaagcgagccgcattgcccgcaaggcggccgaagtggcggcccagggcagcgccgaa
gtggcgcaggtagtggagcgcatgggcgacatcagcgcatcgtcgcggcgcatcggcgac
atcaccggcgtcatcgacggcatcgctttccagaccaacatcctggcgctgaacgctgcc
gtggaagcggcgcgcgccggcgagcagggccgcggcttcgcggtggtggccagcgaggtg
cgcaacctggcgcagcgctcggccgccgcggcaaaggaaatcaaggcgctgatcgaggaa
tcggccggcaaggtcgaggccggcaaccggtatgcgggtgaagcgggccggaccatgtcg
gccgtgctggccgagatcgaacgggtctcggcgctgatggttgaaatcggcaataccagc
cgcgagcagagcgacgggatcgaccaggtcaaccaggccgtgatcgcgatggaccaggtg
acgcagcagaatgccgcgctggtcgaacaggccgcccacggcgccgaggcgatgcagcag
cgcacccgggacttgctggcggccgtggggcggttctcggtggaggacgagcagccggca
cggcggctggccctggcggccatctga
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