Pseudoduganella umbonata: FCL38_02675
Help
Entry
FCL38_02675 CDS
T06138
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
mum
Pseudoduganella umbonata
Module
mum_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_02675
01504 Antimicrobial resistance genes [BR:
mum01504
]
FCL38_02675
Transporters [BR:
mum02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FCL38_02675
Antimicrobial resistance genes [BR:
mum01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
FCL38_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QCP09443
LinkDB
All DBs
Position
640048..641256
Genome browser
AA seq
402 aa
AA seq
DB search
MKNTNKLTALVRPIVGVLAAAGIAITLAGCEDATGKTADAPAASAAGGPPISAALVIEKP
VAETQEFSGRLEAIDRVEIRSRVSGFITAVNFKPGGEVKKGDVLFVIDPRPYQAEADRAE
AAAASARARAELARVELTRAERLLADKAIAQREFDERAASQKELEASARAAQAQSAAAKL
NLSYTRVTSPIDGRVSKAEITLGNLVDASAVLTSVVSLDKIYASFDGDEDTYLRVGAQNH
KGEPVLVKVGLANEEGFPHEGKLEFVDNQLDTQTGSVRMRATFDNKDRALVPGLFARVQL
GGGSAIRNAVLINDRAVGTDQNRKFVFVVGPDNKAEYRAVKLGPTVDGLRVVKEGLKVNE
KIVVNGLQRVRPGAPVTPQMVPMDAEVAKAQDNKKDAKVAAL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgaataaattgacagcactcgtgcgaccgatcgtcggggtattggctgct
gccggcatcgcgatcacgctggccggctgtgaagacgccaccggcaagacggcggacgct
cctgctgccagcgctgccggcggcccgcccatttccgcagcactggtgattgaaaagccg
gtcgcggaaacccaggaattctccgggcgcctggaagccatcgaccgggtcgagatccgc
tcgcgcgtctccggcttcatcaccgcggtgaacttcaagccgggcggcgaagtcaagaag
ggcgacgtgctgttcgtgatcgatccccggccataccaggccgaagcggaccgtgccgaa
gccgccgccgcatcggcgcgtgcccgcgccgaactggcccgggtggaactgacccgcgcc
gaacgcctgctggccgacaaggctatcgcgcagcgtgaattcgacgagcgcgcggcaagc
cagaaggaactggaagccagtgcccgcgccgcgcaggcccagtccgcggcggcgaagctg
aacctgtcgtacacccgcgtcacgtcgccgatcgacggccgcgtgtcgaaggccgagatc
acgctgggcaacctggtcgacgcttctgccgtgctgacctccgtcgtttcgctggacaag
atctacgccagcttcgatggcgacgaggatacctacctgcgcgtgggcgcccagaaccac
aagggcgaaccggtgctggtaaaagtgggcctggccaacgaggaaggctttccgcatgaa
ggcaagctcgaattcgtcgacaaccagctcgacacgcagaccggttccgtacgcatgcgc
gccacgttcgacaacaaggaccgcgcgctggtgcctggcctgttcgcccgcgtgcagctg
ggcggcggcagcgccatccgcaatgcggtgctgatcaacgaccgcgccgtgggcacggac
cagaaccgcaagttcgtcttcgtggtgggccccgacaacaaggccgagtaccgcgccgtc
aagctgggtccgaccgtcgatggcctgcgcgtcgtgaaagagggcctgaaggtgaacgag
aagatcgtcgtcaacggcctgcagcgcgttcgccccggggcacccgtcacgccgcagatg
gtgccgatggatgccgaagtggccaaggcgcaggacaacaagaaggatgccaaggtggcc
gcgctgtaa
DBGET
integrated database retrieval system
