Pseudoduganella umbonata: FCL38_03285
Help
Entry
FCL38_03285 CDS
T06138
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00450
Selenocompound metabolism
mum00970
Aminoacyl-tRNA biosynthesis
mum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FCL38_03285
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_03285
Enzymes [BR:
mum01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
FCL38_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCP09552
LinkDB
All DBs
Position
complement(772451..774007)
Genome browser
AA seq
518 aa
AA seq
DB search
MTIAAQQQEPAQDGTPAQDVKPTQPAQDVKPAQPAQEVKPTQPASAGHVRLPAVHLLLAA
PACQPLLAEYGREQTVEALRGVLAGLRGTLLAGGAADTSEAAVLAALADKLAAANRSTLR
RLFNLTGTVLHTNLGRALLPDAAVQAVADALRWPMNLEWDIGTGKRGDRDSLVEEHLLKL
TGAEAVTIVNNNAAAVLLMLNTLASGREVIVSRGELVEIGGAFRIPDVMTRAGATLREVG
ATNRTHLKDYEDGINANTAMLMKVHASNYAITGFTKEVTLPELAPLARERKLPVAVDLGS
GTLVDLEKYGLPHETTVRETVEGGADLVTFSGDKLLGGPQCGIIAGRRDLVDAIKKNPLK
RALRVGKLTLAALEPVLALYHAPDLLAERLTTLRLLTRPAGAMRALAERLQAPLQQALGG
SYAVSAEAMTSQIGSGALPVDVLPSFGLAVRPAAAPGSAATGRTLRGNPLGVLERRLRAL
PVPVIGRIADDTLWLDLRCLEEAHADEFARQLKALEPA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagcggcgcaacagcaggagccggcgcaggacggaacgccagcgcaggatgta
aagccgacgcagccagcgcaggatgtaaagccggcgcagccagcgcaggaagtgaagccg
acgcagccagcgtcggcgggccacgtcaggctgccggccgtccacctgctgctggcggcg
ccagcctgccagcccctgctggccgaatacggccgcgaacagactgtcgaagcgctgcgc
ggcgtgctggctgggctacgcgggacgttgctcgcgggtggcgcggccgacacatcggaa
gccgccgtgctggccgcgctggccgacaagcttgccgcggcgaaccgctccaccctgcgc
cggctgttcaacctgaccggcaccgtgctgcacaccaacctgggccgcgcgctgctgccc
gacgccgccgtgcaggcggtggccgatgcgctgcgctggccgatgaacctggaatgggac
attggaacgggcaagcgcggcgaccgcgattcgctggtcgaggaacacctgctgaagctg
acgggtgccgaggccgtcaccatcgtcaacaataacgccgctgccgtgctgctgatgctg
aacacgctcgccagcggtcgcgaggtgatcgtgtcgcgcggcgaactggtggagatcggc
ggtgcgttccgcatcccggacgtgatgacgcgcgccggcgccacgctgcgcgaagtcggc
gccaccaaccgcacccacctgaaggactacgaggacggcatcaacgcgaacacggcgatg
ctgatgaaggtccacgccagcaactatgcgatcaccgggttcacgaaagaggtcacgctg
ccggaactggcgccgctggcccgcgaacgcaagctgccggtggccgtggatcttggcagc
ggcacgctggtcgacctggagaagtatgggctgccgcatgaaacgacggtgcgcgaaacc
gtcgagggaggcgccgacctggtcaccttcagcggcgacaagctgctgggcgggccgcag
tgcggcatcatcgccggccgccgcgacctggtggacgcgatcaagaaaaacccgctgaag
cgcgcgctgcgcgtcggcaagctgacgctggccgcgctggaaccggtgctggcgctgtat
cacgcgccggacctgctggccgagcgcctgaccacgctgcgcctgctgacccgccccgcg
ggcgcgatgcgcgcgctggccgaacggctgcaggcaccgctgcagcaggcgctgggcggg
tcgtacgccgtcagtgccgaagccatgacgagccagatcggcagcggcgcgctgcccgtc
gacgtgctgcccagcttcggcctcgcggtccgcccggcggccgcgccgggcagcgccgct
acgggacggaccctgcgcggcaatccgctgggcgtgctggaacgccgcctgcgcgcgctg
ccggtgcccgtcatcggccgcatcgccgacgatacgctgtggctcgacctgcgctgcctg
gaagaagcccatgccgacgaattcgcgcggcagctgaaggcgctggaacccgcatga
DBGET
integrated database retrieval system
