Pseudoduganella umbonata: FCL38_04495
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Entry
FCL38_04495 CDS
T06138
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_04495 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_04495 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_04495 (lysS)
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FCL38_04495 (lysS)
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FCL38_04495 (lysS)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FCL38_04495 (lysS)
Prokaryotic type
Other AARSs
FCL38_04495 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCP09761
LinkDB
All DBs
Position
complement(1091767..1093320)
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AA seq
517 aa
AA seq
DB search
MTIENQGDNQGQVQDQAPGLDDNKIIAERRAKLAAIREQGIAFPNDFRPEHKAADLQAQY
AGKSREELEAEPVPVVLAGRMMLKREAGKKAAFATLQDSSGKACDGRIQIYVTLDATGEA
AMEAFRTYDLGDILGVTGTLFKTKTDELTVKVSELRLITKSLRPLPDKFHGLADQETKYR
QRYVDLIMNEDTRRTFKARTAAISSIRRFMQENEFMEVETPMLHTIPGGAAAKPFITHHN
ALDMQMFLRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYQ
WIMNFTEAVIRQAAVDAHGSAVLTYGGRELDLSKPFHRLTIVGAINKFAPHYTNEQLDDA
EFIKAELKKFGVKPHAHSGLGALQLALFEETAEAQLWEPTFIIDYPEEVSPLARASDTRK
GITERFELFMVGREIANGFSELNDAEDQSARFLAQVAAKEAGDDEAMFYDADYIRALEYG
MPPAGGCGIGIDRLIMLLTDSPNIRDVLLFPHLRKED
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaaaatcaaggcgacaatcagggccaagtccaggaccaggcgccaggcctc
gacgacaacaagatcatcgccgagcgccgcgccaagctggccgcgatccgcgaacagggc
atcgccttcccgaacgacttccgccccgagcacaaggcggccgacctgcaggcgcaatac
gccggcaagtcgcgcgaagaactggaagccgagccggtgcccgtggtgctggccggccgg
atgatgctcaagcgcgaagccggcaagaaggccgcgttcgcgacgctgcaggattcgtcc
ggcaaggcctgcgacggccgcatccagatctacgtgacgctggacgcgaccggcgaggcg
gcgatggaggcgttccgcacctacgacctgggcgacatcctgggcgtgacgggcacgctg
ttcaagaccaagaccgacgaactgaccgtgaaggtcagcgaactgcgcctcatcaccaag
tcgctgcgcccgctgccggacaagttccacggcctggccgaccaggaaaccaagtaccgc
cagcgctacgtggacctgatcatgaacgaggacacgcgccgcacgttcaaggcccgcacc
gccgccatctcgtcgatccgccgcttcatgcaggaaaacgagttcatggaagtggaaacg
ccgatgctgcacacgattccgggcggcgcggcggccaagccgttcatcacgcaccataac
gcgctggacatgcagatgttcctgcgcatcgcgccggagctgtacctgaagcgcctggta
gtgggcggcttcgaccgcgtgttcgagatcaaccgcaacttccgcaacgagggcgtgtcg
atccgtcacaaccccgagttcacgatgatggagttctacgccgcgtacacggattaccag
tggatcatgaacttcaccgaagccgtgatccgccaggccgccgtcgatgcgcacggctcc
gcggtgctgacgtacggcggccgcgagctggacctgtcgaaaccgttccaccggctgacg
atcgtcggcgcgatcaacaagttcgcaccgcactatacgaacgagcagctggacgacgcg
gagttcatcaaggccgagctgaagaaattcggcgtcaagccgcatgcgcactcgggactg
ggcgcgctgcaactggcactgttcgaggaaaccgccgaagcgcagctgtgggaaccgacg
ttcatcatcgactacccggaagaagtgtcgccgctggcgcgcgcctccgatacccgcaag
ggcatcaccgagcgcttcgagctgttcatggtcggccgcgagatcgccaacggcttctcg
gagctgaacgacgcggaagaccagtcggcccgcttcctggcccaggtggccgccaaggaa
gccggcgacgacgaagccatgttctacgatgccgactacatccgcgcgctcgaatacggc
atgccgccggccggcggctgcggcatcggcatcgaccgcctgatcatgctgctgaccgac
tcgccgaacatccgcgacgtgctgctgttcccgcacctgcgcaaggaagactga
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