Pseudoduganella umbonata: FCL38_05140
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Entry
FCL38_05140 CDS
T06138
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_05140
Transporters [BR:
mum02000
]
Other transporters
Pores ion channels [TC:
1
]
FCL38_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QCP09877
UniProt:
A0ABX5UI47
LinkDB
All DBs
Position
1248237..1251245
Genome browser
AA seq
1002 aa
AA seq
DB search
MSLPHVPSIRHPPAAPWHRCGACRVHLSSSGESCFAGHRSGLGVRLHGPIPASVSATRRR
SGAAAGRAAPVARRRGTGPARRCPAGPDQRLLSAVLPARARNRGTVGPPRHGTRYRYPLR
RGRLAQLAVHRVFRALLFPGRARRLLSCRARRLAPCRRAGPHGHACGRNSGPAHGDGDRR
RHAGAGIRECKAAGPQSGFPHKLARKSSYSRPFPVLILFPLKASIATTEKSIRKRMKQHL
LGSRTLALALAQACAGAVAMPSAIAGGADPEPQAAQTEQIERVEVTATRTGAVDVQRVPA
AITVIKPEALGKYGLGNLNDIADLVPAMSVQQQATGVNNITMRGLVVRGIVPSEVQDASL
VAVYIDEMPVTLKSANPDLKVLDLERIEVLQGPQGTLFGAGSMAGTVRQITKKPEFNDLF
GSVEAVGSRTSGFGGGNHNVRGSVNLPLKNDALALRLTGYTGKDSGYIRNQLTGRTTNGV
STNQGRAALRLQASRDLLVDASVTASNIKGGINDAYADLAPYTTIALLPEVGNDKLQLYN
LTVNYELGKAKLVSSTSYLHRDTLYVTSAQYPATAFIFGGQAPLMQSAYTIANKLTDFAQ
EFRLHSQDGGPLKWTVGAFFEKGSRDTLQDQPTTGFDARYAATRNFPGYDSQVNDLATTA
DNYFSGRQYIDSRQAALFAEATYTLWDRLDLTAGLRLFRGTQDFDLRFTGLFGNLATATP
AVPTGVPALASSSATARGANPRFAAAWRVDPDHTLYASAGKGFRYGGNNQPVPFNFCGIN
APATFEPDTLWNFEVGSKNTLFDRRMTFNASAYRIDWDDVQVFNRLPCTYYFTQNAGKIR
SLGLELESLLKITRRASVGINASLNHATATDTVQTGIAAQNIPAGARVPYAPKFAASATA
SYSIPLPNNDEIGIAASYAHRGEAYTNFAREQGNYAEIPSSNTVNATLTWRTRGYEVGLF
GTNLTNGAKVSDVTPNTIAIQPGNTLYLVRPRTVGLRVSARF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgccccatgtcccctcaatccgccatcctcctgctgcaccgtggcaccggtgc
ggtgcttgccgcgttcatttgtcttcatctggtgaatcatgttttgctggccatcgatcc
ggccttggcgttcggcttcatggaccgattccggcaagtgtatcggcaacccgccgtcga
agcggtgctgctgctggccgtgctgctccagttgctcggcggcgcggcactggcccggcg
cggcggtgccctgccggcccggatcagcggctattatctgctgttcttcctgctcgtgca
cgtaaccgcggtactgtggggccgcctcggcatgggactcgataccgatatccgcttcgc
cgcggccggcttgcgcagctggccgtccatcgcgtttttcgcgccctattatttcctggc
cgtgctcgccgtctgctttcatgtcgggctcggcgtctcgcgccatgccggcgcgcgggc
ccgcacggtcacgcttgcggccggaacagtgggcctgctcatggggacggcgatcgtcgg
cggcatgctggcgctggcataagggaatgtaaagcagcgggtccgcaaagcggttttccg
cataagctggcacgtaaatcttcgtattcacggccttttcctgtccttatactttttcca
ttgaaggcgagcatcgccaccactgaaaaaagcataaggaagagaatgaagcagcatctg
ttgggttcccgcacgctggcgctggccttggcccaggcatgcgccggcgcagtcgccatg
ccatccgccatcgcgggcggcgccgatcccgagccgcaggcggcgcagaccgaacagatc
gaacgggtcgaagtgaccgccacgcgcaccggcgccgtggatgtgcagcgggtgcccgcc
gcgatcaccgtgatcaagccggaagcgctcggcaagtatggcctgggcaacctgaacgac
atcgccgacctggtgccggcgatgtcggtgcagcagcaggccaccggcgtcaacaacatc
acgatgcgcggcctggtggtgcgcggcatcgtgccgtcggaagtgcaggatgcgtcgctg
gtggcggtctacatcgacgagatgccggtcacgctgaagtcggccaatcccgacctgaag
gtgctggacctggaacgcatcgaggtattgcaaggcccgcagggcacgctgttcggtgcc
ggctccatggcaggcacggtaaggcagatcacgaaaaagcccgagttcaacgacctgttc
ggctccgtcgaggcggtaggctcgcgtacctccggtttcggcggcggcaaccacaatgtg
cgcggcagcgtgaacctgccgctgaagaacgatgcgctggcgctgcgcctgaccggctat
acgggcaaggattccggctacatccgcaaccagctcaccgggcgcacgacgaatggcgtg
tccaccaaccagggccgcgccgcgctgcgcctgcaggccagccgcgacctgctggtggac
gccagtgtcaccgcctccaacatcaagggcggcatcaacgatgcgtatgcggacctggcg
ccctacaccacgatcgcgctgctgcccgaagtgggcaacgacaagctgcagctgtacaac
ctgaccgtcaactacgagctgggcaaggcgaagctggtgtcgtccacttcatacctgcac
cgcgatacgctgtacgtcacgtcggcccagtatccggccaccgccttcatcttcggcgga
caggcgccgctgatgcagtctgcgtacacgatcgccaacaagctgacggatttcgcgcag
gagttccgcctgcattcgcaggacggcggcccattgaaatggaccgtgggcgccttcttc
gagaagggttcgcgcgatacgctgcaggaccagcccaccacgggattcgacgcgcgctac
gccgccacgcgcaacttccccggctacgattcgcaggtcaacgacctggcgacgacggcg
gacaattacttcagcggccggcagtacatcgattcgcgccaggccgccctgttcgccgaa
gccacctatacgctgtgggaccgcctggacctgacggcgggcctgcgcctgttccgtggc
acgcaggacttcgacctgcgcttcaccggcctgttcggcaacctggccacggctacgccg
gcggtgccgacgggcgttccggcgctcgccagcagcagcgccaccgcacgaggcgccaat
ccccgtttcgcggcagcctggcgcgtcgatccggatcacacgctgtacgcatcggccggc
aaaggcttccgctacggcggcaacaaccagccggtgccgttcaacttctgcggcatcaac
gcccctgccacgttcgagccggacacgctgtggaacttcgaagtcggttcgaagaacacg
ctgttcgaccgccgcatgacgttcaacgccagcgcctaccgcatcgactgggacgacgtg
caggtcttcaaccgcctgccctgcacctactacttcacgcagaacgccggcaagatccgc
agccttggactggaactggaaagcctgctgaagatcacgcggcgcgcctcggtcggcatc
aacgcctcgctgaaccacgcgacggccaccgataccgtgcagaccggcatcgccgcgcag
aatatcccggccggggcacgcgtaccgtatgcgccgaagttcgccgccagcgccacggcc
agctacagcatcccgctgccgaacaacgatgaaatcggcatcgcggccagctatgcgcac
cgcggcgaggcttacacgaacttcgcgcgcgaacagggcaattacgcggagataccgtcg
tcgaacacagtgaacgccacgctgacctggcgcacgcgaggctatgaggtgggcctgttc
ggcaccaacctgacgaatggcgcgaaggtcagcgacgtgacgccgaacaccatcgccatc
cagccgggcaatacgctgtacctggtgcggccgcgcactgtgggcctgcgcgtgagcgcg
cgcttctaa
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