KEGG   Pseudoduganella umbonata: FCL38_08175
Entry
FCL38_08175       CDS       T06138                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
mum  Pseudoduganella umbonata
Pathway
mum03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mum00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FCL38_08175 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mum02044]
    FCL38_08175 (tssM)
Secretion system [BR:mum02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FCL38_08175 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QCP10410
LinkDB
Position
complement(2014724..2018155)
AA seq 1143 aa
MNRYFSSGPGKAWMPLAACLALLTCLVWIEAPLLQVDGRAPFAAAGPRWLLIGALLALPA
LWWVLRLWLARRRDDALAAGVAPAAQPRAGGALVADEVATLAGRMRDALAVLRTANPGWR
MRRQYLYELPWYMFVGAPGSGKTTALSRSGLPFPLADALGPQAIGGIGGTRHCDWWFTDD
AVLLDTAGRYTTQDSQAEMDHAAWSGFLALLKKYRPRRPINGVIVAVSVADLLQQGQAAR
EAQARAIRTRIQELQERLGMAFPVYVMVTKSDLLAGFTEFFDSLGREERRQVWGVTFPLP
GDGMPAHALKAFPAEFLALEAQLQARLLERLQQERDLARRALLFGFPQQFAALGGVLDDF
LRTVFAGNRFEQPALLRGVYFTSGTQQGNPIDRIMASLAASFGLDRRTLPAGPGSGRSYF
LARLMGEVIFPEAGLAGLGTRAARRRRLATLGLLAGGAALALLLAAALGTSYLRNQALVQ
RADAATGALARRIAQAPAGGDELAILPLLDAARALPAGYAARGRPVPLLERMSLYQGEKL
GDGAVAAYRRLLRSTLQPRIAARLEDVLRGGAAGDQDLLYETLRVYLMLGQRRYFDAAAV
QAWVEADWRQRLPQPGGARHPLQDHLAALLEDGMPDPIPLDAALVAQARLALSAMPLNER
LYSRVKRQLAREPLPEVSVNTLLGRDGSGVLARASGASLARGVSGLYSIAGYRRFLPSSA
RAVAAIARDDWVLGGQENGGGNPDARAAQAAVLQRYYDEYVRAWDGFLADLRPVRLADFD
SAARVSNALGGAASPLRAVLAGAARETALAAAGVPGAPAAGQHPVDSHFAPLHRLVAGPA
PTPLDQVLMLVKDAALYFDAAASARRSGAPAPSPGALLQLKRAGEGQAAPLPMLLQGIHD
AGSGLAQGGERERLDALWQGGPARFCRDAIAGRYPMDRASGRDATPDDFARFFAPGGMLD
EFFARELAPFVDRGGARWRWRAAAGPARVSPAALDAFQRGARLRDMFFAGGATVPSLRFT
LRPLAADPGLAALTLEIDGQAVPASRGQAGQAGQAVALAVSGGKGNGLVRFTGVPATAAE
LRTEGPWAWLRMVDRGTAEPLQAERFRLGFSIDGRRGSYELTAGSVINPYRREATQFACP
PGL
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgaaccgatacttttcttccggacccggcaaggcatggatgccgctggccgcctgcctg
gcgctgctgacctgcctggtgtggatcgaagccccgctgctgcaggtggatggccgcgcg
ccgttcgcggccgccgggccgcgctggctgctcatcggcgcgctgctggccttgcccgcg
ctgtggtgggtactacgcctgtggctggcgcggcgccgcgacgacgcgcttgccgccggc
gtggcgcccgccgcgcagccccgtgccggcggcgcgctggtggcggacgaagtggccacg
ctggccggacgcatgcgcgacgcgctggccgtgctgcgcacggcgaatccgggctggcgc
atgcgccgccagtacctgtacgaactgccctggtacatgttcgtgggcgcgccgggcagc
ggcaagaccacggcgctgtcccgttccgggctgccgttcccgctggccgatgcgctgggg
ccgcaggcgatcggcggcatcggcggcacccgccactgcgactggtggttcacggacgac
gcggtgctgctcgacaccgcgggacgctacacgacccaggacagccaggccgagatggac
catgcggcgtggagcggtttcctggccctgctgaagaaataccggccacggcggccgatc
aacggcgtgatcgtggcggtcagcgtggccgacctgctgcagcagggccaggccgcccgc
gaagcccaggcacgcgcgatccgcacccgcatccaggagctccaggagcgcctcggcatg
gcgttccccgtttacgtcatggtgaccaagagcgacctgctggccggtttcacggaattc
ttcgactcgctcggccgcgaggaacgccggcaagtgtggggcgtgaccttccccttgccc
ggcgacggcatgccggcgcacgcgctgaaggcgttcccggccgagttcctggcgctcgag
gcgcagttgcaggcgcgcttgctggagcgtctccagcaggagcgtgacctggcgcgccgc
gcgttgctgttcggcttcccgcaacagttcgcggcgctcggcggggtgctggacgacttc
ctgcggacggtgttcgccggcaaccggttcgagcagccggcactgctgcgcggtgtgtat
ttcaccagcggcacccagcagggcaacccgatcgaccggatcatggcgtcgctggcggcc
tccttcgggctggaccgccgcacattgccggcgggacctggcagcgggcgcagctatttc
ctggcgcggctgatgggcgaggtgatcttccccgaggcgggcctggccggcctgggcacc
cgggcggcgcgccggcgccggctggccacgctggggctgctggccggcggcgcggcgctg
gcgctgctgctggcggcggcactgggcaccagctacctgcgcaatcaggcgctggtgcaa
cgcgcggacgcggcgaccggcgcgctggcgcgccgcatcgcgcaggcacccgccggcggc
gacgagctggccatcctgcctctgctggacgcggcacgggcgctgcccgccggctacgcg
gcgcgcggccggcccgtaccgctgctcgagcgcatgagcctgtatcagggcgaaaagctg
ggcgacggcgcggtcgccgcctaccgccgcctgctgcgcagcacgctgcagccacgcatc
gccgcgcgcctggaagacgtgctgcgcggcggcgctgcgggcgaccaggacctgctctac
gagacactgcgcgtctacctgatgctgggccagcggcgctacttcgacgccgccgcggtg
caggcgtgggtcgaagccgactggcggcagcgcctgccgcaaccgggcggcgcgcggcac
ccgctgcaggatcacctggccgcgctgctggaggacggcatgcccgacccgataccgctc
gatgcggcgctggtggcccaggcgcggctggcgctgtcggccatgccgctgaacgaacgc
ctgtacagccgcgtgaagcggcagctggcgcgcgagccgctgccggaggtcagcgtcaac
acgctgctgggccgcgacggctcgggcgtcctggcgcgcgccagcggcgcatcgctggca
cgcggcgtcagcgggctgtacagcatcgccggataccgccgcttcctgccgtcgagcgcg
cgggccgtcgccgcgatcgcgcgcgacgactgggtgctgggcgggcaggagaacggcggc
ggcaatcccgacgccagggcggcgcaggccgccgtgctgcagcgctattacgacgagtat
gtacgcgcatgggacggcttccttgccgacctgcggccggtgcggctggccgatttcgac
agcgcggcgcgggtcagcaatgcactgggcggcgccgcgtcgccactgcgcgcggtgctc
gccggtgccgcgcgggaaaccgcgcttgccgcggccggtgtcccgggggcgccggctgcg
ggccagcatccggtggacagccacttcgcgccgctgcaccgcctggtggccgggccggcg
cccacgccgctggaccaggtgctgatgctggtaaaggatgcggcactgtatttcgacgcg
gcagccagcgcgcgccgcagcggcgcgccggcgccgtcgcccggtgccctgctgcagctg
aagcgggccggagaaggacaggccgcgccgctgccgatgctgctgcagggcatccacgac
gcgggcagcggcctggcccagggcggcgaacgggagcgcctggacgcactctggcagggc
ggtccggcacgtttctgccgcgatgccatcgccggccgctacccgatggaccgcgccagc
gggcgcgacgccacgcccgacgactttgccaggttcttcgcacccggcggcatgctggac
gagttctttgccagggaactcgccccgttcgtggaccgcggcggcgcgcgctggcgctgg
cgcgcggcggccggacctgcccgcgtgtcgccggcggcgctggacgctttccagcgcggc
gcccggctgcgcgacatgttcttcgccggcggcgccacggtgccgtcgctgcgcttcacg
ctgcggccgctggcggcggatcccggcctggccgcgctgaccctggagatcgatggccag
gcggtgccggcgagccgcggccaggcgggccaggcgggccaggcggtggcactggccgtg
tccggcgggaagggcaatggcctggtacggttcaccggggtgccggcgaccgccgccgaa
ttgcgcaccgaggggccgtgggcctggctgcgcatggtcgaccgcggcacggccgagccg
ttgcaggcggagcggttccgtctggggttctccatcgatgggcgcaggggcagctacgag
ctgacggccggcagcgtgatcaatccgtaccggcgcgaggcaacgcagttcgcttgcccg
cccggcctgtag

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