Pseudoduganella umbonata: FCL38_09000
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Entry
FCL38_09000 CDS
T06138
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_09000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_09000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_09000
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FCL38_09000
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FCL38_09000
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCL38_09000
Prokaryotic type
FCL38_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
QCP10552
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All DBs
Position
complement(2224581..2227007)
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AA seq
808 aa
AA seq
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MQFSENWLRTMVDPKMSSDELSHLLTMSGLEVEEVEPVAPPFTNVVVGHVREVQKHPNAD
RLNVCQVDVGTGTLLNIVCGAPNVREGLRVACATAGAVLPPGADGKPFEIKVGKLRGVES
QGMLCSARELKLSEDHGGLLELPDDAPVGTDFRDYYALNDLKFTIKLTPNKADCLSVLGV
AREVSALTGSPLNAPASPAAAVTLDEKLPVTIGAPDLCGRFAGRVIRNLNAKAATPDWMK
QRLERSGQRSLSALVDISNYVMLELGRPSHVFDLDKIHGGLEVRWGKAGESLKLLNGNTV
SVDEWVGVVADGEQVESLAGIMGGDATAVSLDTTNVYVEAAFWWPNAIQGRARKYNFSTD
AAHRFERGVDYATIPEHIERITALILEICGTSETRVGPIDDQVVNLPERKPVQLRTARAQ
KVIGVPLTDAVIADIFTRLALPFTVENGVFSVTAPSYRFDIEIEEDLIEEVARVYGFENI
PAKPPVAENTMRIAAENERSIFAVRHQLADLGYQEVVNMSFVEAQWELDFNGNTDPIKLQ
NPIASQLSVMRSSLIGSLVANVRYNVNRKAPRVRAFEVGAVYRRDARVQDGPLTVAGYDQ
PQRVGAIAYGPQADEQWGLPTKDADFFDVKADLEALFAPAQLRFAKLEHPALHPGRAASV
SLDGNVIGFIGELHPRWLQKYDLPKAPVVFEVDAVALQQRSVPAYTEISKFPGTSRDLAL
VVPQTVGAQELLDVFAAAVAGSEHARIVQAIVLFDEYRGAGLASDEKSLAFRFSLQDTQT
TLQDEIVDSLMGTLADAATQKLGARARK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctgaaaactggctccgcacgatggtcgatccgaagatgagttcggatgag
ctgtcccacctgctgacgatgtccggcctcgaagtggaagaagtggaacccgtcgcaccg
ccgttcaccaacgtcgtcgtcggccacgtgcgcgaagtgcagaagcacccgaatgccgac
cgcctgaacgtgtgccaggtcgacgtgggtaccggcacgctgctcaacatcgtgtgcggt
gcgccgaacgtgcgcgagggcctgcgcgtcgcttgcgccacggccggtgccgtgctgccg
ccgggcgcggacggcaagccgtttgaaatcaaggtgggcaaactgcgcggagtcgaatcg
cagggcatgctgtgctcggcgcgcgaactgaagctgtccgaagaccatggcggcctgctg
gaactgccggacgatgcgccggtgggcaccgatttccgcgattactacgcgctgaacgac
ctgaaattcacgatcaagctgacgccgaacaaggccgactgcctgtccgtgctgggtgtg
gcacgcgaagtatcggcgctgaccggttcgcctctgaatgcgcccgccagtcccgctgcc
gccgttacgctggatgaaaagctgccggtcacgatcggcgcgccggacctgtgcggccgc
tttgccggccgcgtgatccgcaacctgaacgcgaaggccgcgacgccggactggatgaag
cagcgcctcgagcgcagcggccagcgttcgctgtcggcactggtcgacatctcgaactac
gtgatgctggaactgggccgtccttcacacgtcttcgacctggacaagatccatggcggc
ctcgaggttcgctggggcaaggcgggcgaatcgctcaagctgctgaacggtaataccgtt
tctgtcgacgaatgggtcggcgtggttgccgatggtgaacaggtcgaatcgctggccggc
atcatgggcggcgacgccaccgccgtgtcgctcgacacgaccaatgtctatgtggaagcg
gcattctggtggccgaatgccatccagggccgtgcccgcaagtacaacttctcgaccgat
gcggcgcaccgcttcgagcgcggcgtcgactacgcgacgatcccggagcatatcgaacgc
atcaccgcgctgatcctggagatctgcgggacgtccgagaccagggtcgggccgatcgac
gaccaggtcgtcaacctgcccgaacgcaagccggtacagctgcgcaccgcgcgcgcccag
aaagtgatcggcgtgccgctgaccgatgccgtcatcgccgacatcttcacgcgcctggcg
ctgccgtttaccgtcgagaacggcgtcttcagcgtcacggcgccgagctaccgcttcgac
atcgagatcgaggaagacctgatcgaggaagtagcgcgcgtgtacggcttcgagaacatc
ccggccaagccgccggtggccgagaacacgatgcgcatcgccgcggagaacgagcgctcg
atcttcgccgtgcgccaccagctggccgacctgggctaccaggaagtggtcaacatgagc
ttcgtggaagcgcagtgggaactggatttcaacggcaataccgatccgatcaagctgcaa
aatccgatcgccagccagttgtccgtgatgcgctcgtcgctgatcggcagcctggtcgcg
aacgtgcgctacaacgtcaaccgcaaggcgccgcgcgtgcgtgcattcgaggtgggggcg
gtctaccgccgcgacgcccgcgtgcaggacggtccgctgacggtggccggctacgaccag
ccgcagcgcgtcggcgccatcgcctacggcccgcaggcggacgagcagtggggactgcca
accaaggatgccgacttcttcgacgtcaaggccgacctggaagcgctgttcgcgcccgcc
cagttgcgcttcgccaagctggagcatccggcgctgcatccggggcgcgccgcgtccgta
tcgctggacggcaacgtgatcggcttcattggcgagctgcacccgcgctggctgcaaaag
tacgatctgccgaaggcgcccgtcgtgttcgaagtggatgctgttgcattgcaacaacgt
tcggtaccggcctacacggaaatctcgaagttcccaggcaccagccgcgaccttgccctg
gtggttccgcaaacggtgggagcccaggaattgctggacgtcttcgccgccgcggtcgcc
gggagcgagcatgcgcgcatcgtgcaagccattgttttgtttgatgaataccgcggcgcc
gggcttgcgtcggacgagaaatcacttgctttccgctttagcttgcaagatactcaaaca
accctgcaggacgaaatcgtcgatagtttgatgggtacgctggctgatgcagccacgcaa
aaactcggcgcgcgagcacgcaagtaa
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