Pseudoduganella umbonata: FCL38_09470
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Entry
FCL38_09470 CDS
T06138
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
mum02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_09470
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FCL38_09470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mum02035
]
FCL38_09470
Bacterial motility proteins [BR:
mum02035
]
Flagellar system
Chemotaxis proteins
MCPs
FCL38_09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cache_3-Cache_2
MCPsignal
sCache_3_3
sCache_2
dCache_2
HAMP
sCache_3_2
dCache_1
DUF1664
SKA1
Motif
Other DBs
NCBI-ProteinID:
QCP10635
LinkDB
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Position
2337346..2339418
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AA seq
690 aa
AA seq
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MKNSTFNLRNWSVGSRITAMTFGLLSVTLAVLITIISVSTSRMLEERSIASVRQDLTGVK
NMVELFNTAVTSEVNAFAKVLAADFHGEFSLDPATVIEVGGRSTPALKIGDTVLNNNFTI
PDNFTAASGGGATIFVATGEDFVRVSTTTKKEDGSRAVGTILDHKHPGYAVLRGGQPYVG
LATLFGKQFITRYDPVRDAGGNVVGVLYVGVNVSKEMATLKERIASIKVGTTGYFYVLDS
TPGANYGKLVVHPKREGDVIADSKDSDGRLFIREILEKKEGIITYPWLNPDETSPRDKIV
AYATFKDWNWVIAGGAYRAEITAEATHLRNWYIAAGFLALLGFSAVMFFGVRSYITRPLR
QVEQAATQIAAGDLTVQLAVDGDDEIARLTRAMNGISASLSAVVGQVRSGADQIAMASGE
IASGNQDLSQRTEQQAGNLEETASSMEELTATVRQNAENARQANQLAQSASDVAARGGMV
VSQVVDTMGSIDASARKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RTLAQRSAAAAHEIKGLIGNSVGQVEAGSKLVEQAGATMQEVVDSVRRVTDIMAEIRTAS
DEQSAGIEQVNTAITHMDQVTQQNAALVEQAAAAAAAMQEEAATLAQVVRQFQLDESLAA
QAKKTRVQDAGERIQIGRDLKERGHLLTSR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattccactttcaatcttcgcaactggagcgtcggctcgcgcatcacggcgatg
acgttcggcctgctgtccgtcacgcttgcggtcctgatcacgatcatcagcgtcagcacc
agccggatgctcgaggaacggtccattgccagcgtgcggcaggacctgacgggtgtgaag
aacatggtggaactgttcaataccgccgtcaccagcgaggtcaatgccttcgccaaggtc
ctggcagccgatttccacggcgagttctcgctcgatcccgccaccgtcatcgaggtgggc
ggccgcagtacaccggcgctgaagatcggcgacaccgtgctgaacaataatttcacgatt
cccgacaatttcaccgccgcgagcggtggcggcgccacgatcttcgtagcgaccggcgag
gatttcgtgcgcgtgtccaccaccaccaagaaggaagacggcagccgcgcggtcggcacc
atcctcgaccacaagcaccccggctacgccgtgctgcgcggcggccagccctacgtgggc
ctggccacgctgttcggcaagcagttcatcacccgctacgacccggtgcgcgatgccggc
gggaacgtcgtcggcgtgctgtacgtcggtgtcaacgtctcgaaggagatggccacgctg
aaggagcgcatcgcttcgatcaaggtcggcaccaccggctacttctacgtgctcgattcg
acgccgggggccaactacggcaagctggtcgtccatcccaagcgcgaaggcgacgtgatc
gccgattcgaaggattccgacggccgcctgttcatccgtgaaatcctggaaaagaaggaa
ggcatcatcacctacccctggctgaatccggacgagaccagcccgcgcgacaagatcgtc
gcgtacgcgacgttcaaggactggaactgggtcatcgccggcggcgcctatcgcgcggaa
atcaccgccgaggcgacgcatctgcgcaactggtacatcgctgccggcttcctcgcgctg
ctcggcttctcggcagtgatgttcttcggcgtgcgcagctacatcacacgcccgctgcgc
caggtcgaacaggccgccacgcagatcgccgccggcgacctgaccgtgcagctggccgtc
gacggcgacgacgagatcgcccgcctgacgcgcgcgatgaacggcatcagcgccagcctg
tcggccgtggtgggccaggtgcgcagcggcgccgaccagatcgccatggcgtccggcgaa
atcgccagcggcaaccaggacctgtcgcagcgcaccgagcagcaggccggcaacctggag
gaaacggccagctcgatggaagaactgacggcgacggtacgccagaatgcggagaacgcg
cgccaggccaaccagctggcgcaaagcgcctccgacgtggcggcacgcggcggcatggtc
gtttcgcaggtggtcgatacgatgggctcgatcgatgcgtcggcgcgcaagatcgtcgac
atcatcggcgtcatcgacggcatcgcgttccagaccaatatcctggcgctgaatgcggcg
gtggaagcggcacgcgccggcgagcagggccgcggcttcgccgtggtcgcgggcgaagtg
cgcacgctggcccagcgcagcgctgcggccgcgcacgaaatcaagggactgatcggcaac
tcggtcggccaggtggaagccggcagcaagctcgtcgagcaggccggcgcgacgatgcag
gaagtggtcgacagcgtacgccgcgtcaccgacatcatggccgagatccgcaccgccagc
gacgaacagtcggccggcatcgaacaggtgaacaccgcgatcacgcacatggaccaggtg
acgcagcagaatgcggcactggtcgagcaggccgccgcggcggccgcggcgatgcaggaa
gaagcggccacgctcgcgcaggtggtacgccagttccagctcgatgaatcgctggctgcg
caggcaaaaaaaacccgcgtccaggacgcgggtgaaaggattcaaatcgggagagatttg
aaagagcgaggccatcttctcacgtcgagatga
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