Pseudoduganella umbonata: FCL38_10745
Help
Entry
FCL38_10745 CDS
T06138
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mum03000
]
FCL38_10745
Transcription factors [BR:
mum03000
]
Prokaryotic type
Helix-turn-helix
Other families
FCL38_10745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
PAS_4
HTH_8
AAA_5
AAA_16
HTH_IclR
PAS
AAA
AAA_2
DUF815
T2SSE
nSTAND6
HTH_23
AAA_22
HTH_29
AAA_7
HTH_7
Torsin
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QCP10854
UniProt:
A0A4P8HQW4
LinkDB
All DBs
Position
complement(2665099..2667063)
Genome browser
AA seq
654 aa
AA seq
DB search
MKKDAYSRHVDHVMSAALHGAPAEVGDELILKSWRRCIADYGLDPSRLRAPHIVTSHTLR
AHQEQIEQFMGVARVGMEQMYKRVSGLGYVLLLTDAAGVTVDYIGNDAHAAELKKAGLYL
GAEWSEQSAGTCAVGTCVAEQAALTCHQADHFDPTHIPLTCSAAPLFDPEGKFLAVLDLS
ALTSPADKKSQHLALHLTMMYAQMIEDANFLRHFEDRAILRLGTTWALVEVSGEIMLAYD
EQGTVVGANTGARRLFRDAAAGVGGRTLAELFELAPADLHRLLRFQDASDRSIVTRGGGR
MFYTSVRPPRQRPAARRIAVDAAGDSQASLPELERLAGDDKAMRRLLDQAKRLVNRKLNI
LVHGETGTGKEVVARALHQSSNRAARPFVAVNCGAIPESLIESELFGYTAGTFTGGRAKG
MKGLILQSDGGTLFLDEIGDMPLHLQTRLLRVLSEKEVLPLGADRPVPLDLTVIAASHRD
LRNLIGAGTFREDLYYRLCGATLHLPPLRLRDDKRYLIAKVLSEEAELLGRDAQLSADAM
HALLSFGWPGNIRQLRNVLRYALAISDGALVMHADLPQELTDQFSATHGTSAVPALPWRE
TGVEESGDADAGALHAALVRSKWNVTRAAADLNLARATVYRYMRKFGIVPPNQR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacgcatacagccggcacgtcgaccacgtgatgtcggctgcgctgcatggc
gcgccggccgaagtcggggacgagctgatcctcaagtcgtggcggcgctgcatcgccgac
tacgggctcgatccttcccggctgagggcgccgcacatcgtcacgtcgcataccttgcgc
gcgcaccaggaacagatcgagcagttcatgggcgtggcgcgcgtcggcatggagcagatg
tacaagcgcgtgtccgggctcggctatgtgctgctgctgacggatgccgccggggtcacg
gtggactacatcggcaacgacgcccatgccgccgaactgaagaaggccggcctgtacctg
ggcgccgaatggagcgagcagtcggccggcacgtgcgcggtgggcacctgcgtggccgag
caggcggcgctgacctgccaccaggccgaccatttcgatcccacgcacataccgctgacc
tgttccgcggcgccgctgttcgacccggaaggcaagttcctggccgtgctcgacctgtcc
gcgctgacctcgccggccgacaagaaaagccagcatctcgcactgcacctgacgatgatg
tacgcgcagatgatcgaggatgccaatttcctgcggcacttcgaggatcgcgcgatcctg
cgcctcggtaccacgtgggcgctcgtcgaggtcagcggcgagatcatgctggcctacgac
gaacagggcaccgtggtcggggcgaacaccggcgcgcgccgcctgttccgggatgccgcc
gccggcgtcggggggcgcaccctggccgagctgttcgagctcgcccctgccgacctgcac
cggctgctgcgcttccaggacgccagcgatcgctcgatcgtcacgcgcggtggcggccgg
atgttctacaccagcgtcaggccgccgcggcagcgtccggcggcacgccgtatcgccgtc
gacgcggccggcgatagccaggccagccttcccgagctggagcggctggcgggcgacgac
aaggcgatgcgccggctgctggaccaggccaagcgcctggtcaaccgcaagctgaacatc
ctggtccatggcgagacgggaaccggcaaggaagtcgtcgcccgggcgctgcaccagtcg
agcaatcgcgccgccaggcccttcgtggccgtcaattgcggcgcgattcccgagtcgctg
atcgagagcgagctgttcggctatactgcgggcactttcactggggggcgggcgaaaggc
atgaagggcctgatcctgcagtccgatggcggtacgctgttcctcgacgagatcggcgac
atgccgctgcacctgcaaacccggctgttgcgcgtgctgtcggaaaaagaggtgctgccg
ctgggcgccgaccggccggtgccgctggacctgaccgtgatcgccgcctcgcaccgcgac
ctgcgcaacctgatcggcgctggcacgttccgggaggacctgtattaccgcctgtgcggt
gccacgctgcacctgccgccgctgcgcctgcgcgacgacaagcgctatctcatcgccaaa
gtgctgtccgaggaagccgaactgctcggcagggatgcgcagctgagcgccgatgccatg
catgcgctgctgtccttcggctggccgggcaatatccgccagctgcgcaatgtgctgcgc
tatgcgctggcgatctcggacggggccctggtcatgcatgccgacctgccgcaggaactg
accgaccagttctccgccacccacggcacgtcggccgtacccgcgctgccgtggcgggag
accggtgtggaggagagcggcgacgccgacgccggcgcactgcatgccgccctcgtccgc
agcaagtggaacgtcacgcgcgccgcggccgatctgaacctggcgcgcgccaccgtctac
cgctacatgcgcaagttcggcatcgttccgccgaaccagcgctag
DBGET
integrated database retrieval system
