Pseudoduganella umbonata: FCL38_11235
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Entry
FCL38_11235 CDS
T06138
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mum03110
]
FCL38_11235 (clpB)
Chaperones and folding catalysts [BR:
mum03110
]
Heat shock proteins
HSP100
FCL38_11235 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_24
nSTAND3
AAA_14
IstB_IS21
ATPase_2
Mg_chelatase
NBD_SMAX1
bpMoxR
TniB
AAA_7
AAA_18
Zeta_toxin
DUF815
AAA_19
NACHT
DNA_pol3_delta2
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
QCP10931
UniProt:
A0A4V1EDF8
LinkDB
All DBs
Position
complement(2772433..2775057)
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AA seq
874 aa
AA seq
DB search
MRQDKLTTKLQEALADAQSLAVGNDNPYIEPVHLLTALLNQDDSSTRSLLQRAGVNVGGL
AAALKGAIERAPKVSGTGGNVQVSREFVNMLNLADREAQKRGDQFVSSEMVLLALADDKS
DAGRLARENGLSRKSLEAAIDAVRGGGKVDSQEAEGQREALKKYTMDLTERARQGKLDPV
IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNNEVPDSLRGKRVLSL
DMAALLAGAKYRGEFEERLKSVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDEPTVEATIAILRGLQDKYELH
HKVEITDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLERRLI
QLKIEKEAVKREKDEGSRKRLDLIDEEIAKLQREYNDYEEVLKAEKANVQGTTHIKEEIE
RIRQEMEEATRASNWARVSELQYGRLPELEAQLKQAESGNGDSGAGNAGNDKPKLLRTQV
GAEEIAEVVSRATGIPVSRMMQGERDKLLHIEEKLHERVVGQDEAINAVADAIRRSRAGL
ADPNRPYGSFMFLGPTGVGKTELSKALAAFLFDTEESMIRIDMSEFMEKHSVARLIGAPP
GYVGYDEGGYLTEAVRRKPYSVILLDEVEKAHHDVFNVLLQVLDDGRMTDGQGRTVDFKN
TVIIMTSNLGSQKIQSMDDSDPAVVKLAVMAEVRGHFRPEFINRIDEIVVFHGLDEKNIG
AIAKIQLQILEDRLKRMEMGLQISDAALQKIAEAGYDPVYGARPLKRAIQQQIENPLSKL
ILEGRFGPKDTIRIDARDGALVFGAEGKVDIVKQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagacaaacttactacaaaacttcaggaagcactcgccgacgcccagagcctg
gccgtcggtaacgacaacccctatatcgagcccgtgcacctgctgacggccctgctgaac
caggacgacagcagcacgcgctcgctgctgcagcgtgccggcgtcaacgtcggcggcctg
gccgccgccctgaagggcgcgatcgagcgggcgccgaaggtctccggcaccggcggcaac
gtgcaggtcagccgcgaattcgtcaacatgctgaacctggccgaccgggaagcgcagaag
cgcggcgaccagttcgtgtccagcgagatggtgctgctggcgctggcggacgacaagtcc
gacgccggccggctggcccgcgaaaacggcctgtcgcgcaaatcgctggaggcggcgatc
gacgccgtgcgcggcggcggcaaggtcgattcgcaggaagcggaaggccagcgcgaggcg
ctgaaaaaatacacgatggacctgaccgagcgggcccgccagggcaagctcgatccggtg
atcggccgcgacgacgagatccgccgcgcgatccaggtgctgcagcgccgcaccaagaac
aacccggtgctgatcggcgaaccgggtgtcggcaagacggccatcgtcgaaggcctggcc
cagcgcatcgtcaacaacgaagtgcccgattcactgcgcggcaagcgcgtgctgtcgctg
gacatggcggcgctgctggccggcgccaagtaccgcggcgaattcgaggaacggctgaaa
tcggtgctgaatgaactggccaaggacgaaggccagaccatcgtgttcatcgacgagctg
cacacgatggtcggcgccggcaaggccgagggcgcgatggatgcgggcaacatgctgaaa
cccgcgctggcgcgcggcgagctgcattgcgtgggtgccaccacgctcgacgagtaccgc
aagtacatcgagaaggatgccgcactggagcggcgcttccagaagatcctcgtcgacgag
ccgaccgtggaagcgacgatcgcgatcctgcgcggcctgcaggacaagtacgagctgcac
cacaaggtggaaatcaccgacccggcgatcatcgccgcggccgagctgtcgcaccgctac
atcaccgaccgcttcctgcccgacaaggcgatcgacctgatcgacgaagccgcgtcgaag
atcaagatcgagatcgattccaagccggaggtgatggacaagctggaacgccggctgatc
cagctgaagatcgagaaggaagccgtcaagcgcgagaaggacgaagggtcgcgcaagcgc
ctcgacctgatcgacgaggagatcgccaagctgcagcgcgagtacaacgactacgaggaa
gtgctgaaggccgagaaggccaatgtacagggcaccacgcacatcaaggaagagatcgag
cgcatccgccaggagatggaggaagctacacgcgcgtcgaactgggcacgcgtgtcggaa
ctgcagtatggccggctgcccgagctggaggcgcagctgaagcaggcggagtctggcaac
ggcgacagcggtgccggcaacgcgggcaatgacaagccgaaactgctgcgcacgcaggtg
ggtgccgaggaaatcgccgaagtggtgtcgcgcgcgaccggcattcccgtgtcgcgcatg
atgcagggcgagcgcgacaagctgctgcacatcgaggaaaaactgcacgagcgcgtggtc
ggacaggacgaggcgatcaacgccgtggccgacgcgatccgccgctcgcgcgccggcctg
gccgatccgaaccgcccgtatggctcgttcatgttcctgggcccgacgggggtgggcaag
acggaactgtcgaaggcactggccgccttcctgttcgataccgaggaatcgatgatccgc
atcgacatgagcgagttcatggagaagcattcggtggcccggctgatcggcgcgccgccg
ggctacgtgggctacgacgagggcggctacctgaccgaggcggtgcgccgcaagccgtac
agcgtgatcctgctcgatgaagtggagaaggcgcaccacgacgtgttcaacgtgctgctt
caggtcctcgacgacggccgcatgacggatggccagggccgcaccgtggacttcaagaac
acggtgatcatcatgacgtcgaacctggggtcgcagaagatccagtcaatggacgactcg
gatccggcggtggtgaagctggccgtgatggccgaggtgcgcggccacttccggcccgag
ttcatcaaccggatcgacgagatcgtggtgttccacggcctggacgagaagaacatcggt
gcgattgccaagatccagctgcagatcctggaagatcgcctgaaacgcatggagatgggc
ctgcagatcagcgacgcggcgctgcagaagatcgccgaagcgggctacgacccggtgtat
ggcgcgcggccgctgaagcgggcgatccagcagcagatcgagaatccgctgtcgaagctg
atcctggaagggcgcttcgggccgaaggacaccatccgcatcgatgcgcgcgacggcgcg
ctggtgttcggcgccgaaggcaaggtcgatatcgtcaagcagtaa
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