Pseudoduganella umbonata: FCL38_11715 Help Entry FCL38_11715       CDS       T06138                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism mum  Pseudoduganella umbonata Pathway mum03018   RNA degradation Brite KEGG Orthology (KO) [BR:mum00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FCL38_11715  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mum03019]     FCL38_11715 Enzymes [BR:mum01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      FCL38_11715 Messenger RNA biogenesis [BR:mum03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      FCL38_11715 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII ERCC3_RAD25_C P-loop_SecA AAA_22 Motif Other DBs NCBI-ProteinID:  QCP11006 UniProt:  A0A4P8HPJ1 LinkDB All DBs Position complement(2875384..2876637) Genome browser AA seq 417 aa AA seqDB search MSFASLGLAPALLDAVAAIGHDTPTAIQSAAIPAALQGRDVLGAAQTGSGKTAAFALPML HALLARQGTRRGLHGLVLVPTRELAAQVGDAIRALVQHLPSTIKVSIAFGGVSINPQMMA LRGGTDIIVATPGRLLDLARHNAVKLDGVATLVLDEADKLLDMGFADEIAEILALLPARR QNLFFSATFPAAVQALATSLLHDPVRAQLTDDAADEPDIAQRAIEVDGARRLQLLRHLIK EHGWQQVLVFVATKYASEHVADKLRRNGLAAETFHGDFSQGARTGVLADFKAGRMTVLVA TDVAARGIDIAQLPVVVNFDLPRAAADYTHRIGRTGRAGASGIAVSFITPDAEAHFRLIE KRQGRRVPRERIAGFEPSEAAIAAAAAAPVADPNGGVKGKRKSKKDKLREAAAKPSA NT seq 1254 nt NT seq  +upstreamnt  +downstreamnt atgtcctttgcttccctgggcctcgcgcccgccctgctcgatgccgtggccgccatcggc cacgacaccccgaccgccatccagtcggccgccattcccgccgcgctgcaggggagggat gtgctgggcgcggcgcagaccgggtccggcaagacggcggcgttcgcactgccgatgctt cacgcgctgctggcgcgccagggtacccgccgcggcctgcacggcctggtgctggtgccg acgcgcgaactggccgcgcaggtgggcgacgcgatccgcgcactggtgcagcacctgccg tccacgatcaaggtgtcgatcgcgtttggcggcgtgtcgatcaacccgcagatgatggcg ctgcgcggcggtaccgacatcatcgtcgccacgccgggccgcctgctcgacctggcacgc cacaatgccgtgaagctggacggcgtcgccacgctggtgctggacgaagcggacaagctg ctcgacatgggctttgccgacgagatcgcggaaatcctcgcgctgctgccggcaaggcgc cagaacctgttcttctccgccacgttcccggccgccgtccaggcgctggccacgtcgctg ctgcacgatcccgtgcgggcacagttgacggatgacgcggcggacgagccggacatcgcc cagcgcgccatcgaagtggacggggcgcgccgcctgcagctgctcaggcacctgatcaag gagcacggctggcagcaggtcctcgtgttcgtcgccaccaagtatgcatcggagcacgtg gccgacaagctgcgccgcaatggcctggcggccgaaaccttccacggcgatttcagccag ggggcgcgcaccggggtgctggccgatttcaaggccggccgcatgacggtgctggtcgcc accgacgtcgccgcgcgcggcatcgacatcgcgcagttgccggtcgtcgtcaatttcgac ctgccgcgcgccgctgccgactacacgcaccgcatcggccgcaccggccgcgcgggcgcc agcggcatcgccgtcagtttcatcacgccggatgccgaggcgcacttccggctgatcgag aaacggcagggcaggcgcgtgccgcgcgagcgcatcgccggcttcgagccgtcggaagcg gccatcgcggcggccgccgccgcgccggtggccgacccgaacggcggcgtcaagggcaag cgcaagagcaagaaggacaagctgcgcgaggccgccgccaagccgtcggcgtaa

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