Pseudoduganella umbonata: FCL38_11825
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Entry
FCL38_11825 CDS
T06138
Name
(GenBank) HAMP domain-containing protein
KO
K07638
two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:
2.7.13.3
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_11825
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mum01001
]
FCL38_11825
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mum02022
]
FCL38_11825
Enzymes [BR:
mum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
FCL38_11825
Protein kinases [BR:
mum01001
]
Histidine kinases
OmpR family
FCL38_11825
Two-component system [BR:
mum02022
]
OmpR family
EnvZ-OmpR (osmotic stress response)
FCL38_11825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RisS_PPD
HATPase_c
HAMP
HisKA
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
QCP11021
LinkDB
All DBs
Position
2897637..2899034
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AA seq
465 aa
AA seq
DB search
MCSSRRDSRADACRPMRFRNISLARLKSGLFWRTFLLLGVLTTLSMASWTGMISWVQRGP
QAQQLAAQVISVVTITRAALTHSAPELRTELLFELVSNEGIRVFLLEENDEVDPPPDIAL
MPDIERLVKAKLGKSTRFSARVNGMRGFWVSFYIGEDQYWLMLERERIPWLTGIQWLGWA
AVVSLVSLLGAAAISSLVNAPLRRLTAAFRAIAQGRRPEPLPEKGPQEIRQANRSFNQMV
DDLQQVESDRAVILAGISHDLRTPLTRMQLEVEMADLSADARDGMKSDLAQMDAIIAQFL
DYAKPTEASTFVPLDVTAMLEEVAHEVSRLPDVKVTTDITCPAQVMGNGTDLKRVFHNLI
ENARRYGKTPGTDMAEIDIRCSVKGMHTAKRVVIDVEDHGVGVPEERMAELLKPFTRLDE
ARSQANGAGLGLAIVERVLQRHDAELNLSNREGGGLSIQITLEAV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatcccggagggacagccgcgctgatgcgtgccgtccgatgaggttccgtaat
ataagtctggcccgcctgaagagcgggctgttctggcgtaccttcctgctgctcggcgtg
ctgacgacgctgtcgatggcgtcgtggaccggcatgatcagctgggtccagcgcgggccg
caggcgcagcaactggccgcgcaggtgatctcggtcgtcaccatcacgcgcgcggcgctg
acccactccgcccccgaactgcgcaccgaactgctgttcgaactcgtgtcgaacgaaggc
atccgcgtattcctgctggaagaaaacgacgaagtcgacccgccgccggacatcgccctg
atgcccgacatcgaacggctcgtcaaggccaagctgggcaagtccacccgcttctcggcg
cgcgtcaacggcatgcgcggcttctgggtcagcttctacatcggcgaagaccagtactgg
ctgatgctcgagcgcgaacgcattccatggctgacaggcatccagtggctcggctgggcg
gccgtcgtgtcgctggtttccctgctgggcgcagccgcgatttccagtctcgtcaacgcg
ccgctgcgccgcctgaccgccgcgttccgcgccatcgcgcagggccgccgcccggagccg
ctgccggaaaaagggccgcaggaaatccgccaggccaaccgcagcttcaaccagatggtc
gacgacttgcagcaggtggaatcggaccgcgcggtgatcctggccggcatctcgcacgac
ctgcgcacgccgctgacgcggatgcagctggaagtggaaatggccgacctgtcggcggat
gcgcgcgacggcatgaagtccgacctggcgcagatggatgcgatcatcgcccagttcctc
gattacgcgaaaccgaccgaggcttccaccttcgtgccgctggacgtgacggccatgctg
gaagaagtggcacatgaagtgtcgcgcctgccggacgtgaaagtcactaccgacatcacc
tgcccggcccaggtcatgggcaatggtaccgacctgaaacgggtgttccacaacctgatc
gagaatgcgcgccgctatggcaagacgcccggcacggacatggccgagatcgacatccgc
tgctccgtcaagggcatgcataccgcgaaacgggtggtgatcgacgtcgaggaccatggc
gtgggcgtgccggaagagcggatggccgagctgctgaaaccgttcacccggctcgacgag
gcgcgcagccaggccaacggcgccggcctgggcctggccatcgtcgagcgcgtgctgcaa
cggcacgatgcggagctcaacctcagcaatcgcgaaggtggcggcctgtcgatccagatc
acgctggaagcagtctag
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