Pseudoduganella umbonata: FCL38_12425
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Entry
FCL38_12425 CDS
T06138
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
mum02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_12425
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FCL38_12425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mum02035
]
FCL38_12425
Bacterial motility proteins [BR:
mum02035
]
Flagellar system
Chemotaxis proteins
MCPs
FCL38_12425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
MnmE_helical
SKA1
HAMP_2
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
QCP11125
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Position
complement(3043728..3045350)
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AA seq
540 aa
AA seq
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MGNLRIGARLALGFALVLALLAAMTVTGVLRMNGASRLTDELVTQRVHNERLMAEWNKVI
EVNAARTIAAFLAPDAATQKAIEATMAASSKRATEIQDLLGRTLADDDSRRGHAAVMAAR
KQYSDIRKNMLAAKVAGDMATAQRLYATDLNTSRETYLAALASLLKTQQTALDATAAAIH
ANYAAGRNLLVALGIGATVAGVLLAWRLTRAITAPLRQAVQVAENVSSGNLTSAIDASRG
DETGELMRALKKMNGSLQTIVGQVRNGTDTIATAAAGIAAGNFDLSSRTEQQASALQQTA
ATMEELTSTVRSNADNARAGRTLADGAAVLAGQGGTVVADVVRTMEDINASSARIVDIIA
VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAARSAAAAREIKELIGDSVQ
KVQAGSALVDRAGQAMGDIDAAIGKVTQIMNQIADASAQQQDGIEQVNTAITQMDQVTQQ
NAALVEQAAAAAAAMQEQAERLADAVAVFRLDTAPPSRRREDHGSGEDHRGGSRPIALPA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcttcgtatcggcgcgcggctggcgctcggctttgcgctcgtgctggcgctg
ctggcggcgatgacggtcaccggcgtgctgcgcatgaacggcgccagccggctgaccgac
gaactggtcacccagcgggtccataacgagcgcctgatggccgagtggaacaaggtcatc
gaagtcaacgcggcccgcacgatcgccgccttcctggcaccggacgcggcaacgcaaaag
gccatcgaggcgacaatggcggcctcgtcgaagcgggccacggaaatccaggacctgctg
gggcgcacgctggccgatgacgactcccgccgcggccacgccgccgtgatggccgcgcgc
aagcagtacagcgatatccgcaagaacatgctggcggcgaaggtggccggcgacatggcc
accgcccagcgcctctacgcgaccgacctgaatacgagccgtgaaacgtacctggccgcg
ctggcaagcttgctgaaaacgcagcagacggcgctcgatgccactgccgccgccatccac
gccaactatgccgccggccgcaacctgctggttgcgctgggtatcggcgccaccgtggcc
ggcgtgctgctggcctggcggctcacgcgcgcgatcacggcgccgctgcggcaggccgtg
caggtggccgagaacgtatcgtccggcaatctcaccagtgccatcgatgcttcgcggggc
gacgagaccggtgaactgatgcgtgcgctgaaaaagatgaacggcagcctgcagaccatc
gtcggccaggtgcgcaacggcaccgacacgatcgccaccgccgccgcggggatcgccgcc
ggcaacttcgacctgtcgtcgcgcaccgagcagcaggccagcgcactgcagcagaccgcc
gccacgatggaggaactgacgtccaccgtgcgctcgaatgccgacaacgcgcgcgcaggc
cgcacgctggccgatggcgccgccgtccttgccggccagggcggcaccgtggtggccgac
gtcgtgcgcacgatggaggacatcaacgcatcgtcggcccgcatcgtcgacatcatcgcc
gtcatcgacggcatcgcgttccagaccaatatcctggcgctcaatgcggccgtcgaagcg
gcgcgcgcaggcgagcagggcaggggattcgccgtcgtcgcgtccgaagtgcgcgcgctg
gcggcgcgatcggcggcggcggccagggaaatcaaggaactgatcggcgactcggtacag
aaggtgcaagccggttccgcgctggtggaccgcgccggccaggcgatgggcgacatcgac
gcggcgatcggcaaggtcacgcagatcatgaaccagatcgccgatgccagcgcgcagcag
caggacggcatcgagcaggtcaacacggcgatcacgcagatggaccaggtgacgcagcag
aacgcggcgctggtcgaacaggccgccgccgccgcggcggcgatgcaggagcaggccgag
cggctggccgacgcggtggccgtgttccggctcgatacggcaccgccgtcgcgccgccgc
gaagatcacggcagcggtgaagaccaccgtggcgggagccggcccatcgcgctgcccgcc
tga
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