Pseudoduganella umbonata: FCL38_12550
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Entry
FCL38_12550 CDS
T06138
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mum03009
]
FCL38_12550 (der)
Ribosome biogenesis [BR:
mum03009
]
Prokaryotic type
GTPases
FCL38_12550 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
AAA_22
ABC_tran
AAA_24
Roc
Ras
ATP_bind_1
AAA_29
SRPRB
Guanylate_kin
Septin
Motif
Other DBs
NCBI-ProteinID:
QCP11147
LinkDB
All DBs
Position
complement(3071212..3072558)
Genome browser
AA seq
448 aa
AA seq
DB search
MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF
EPVAKEGIMFQMALQTKQAVAEADVVIFLVDGRQGMTPHDKTITDFLRRSGRPVLLVVNK
AEGMKYTSAVSDFYELGLGDPYAISGAHGDGVTDLVYEALDKAFASRPEDAEELLPSERG
IKLALVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDSIEIPFERDGKHYTLIDTAGIRR
RGKVFEAIEKFSVVKTLQSISEANVVILMLDAQQDISEQDAHIAGFILESGRALVLAVNK
WDGLQTHQRDQVKNDMDRKLDFLGFAKTHFISALKGTGIGPLMKSVDAAYGAAMADLSTP
KLTRALQEAIEKQEPKRKGGLRPKLRYAHQGGMNPPVIVIHGNSLDAISEPYKRYLEKHF
RETFQLVGTPLRIELRTGKNPFDKREKS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggtaatcgcactcgtggggcgcccgaacgtcgggaaatcgacccttttcaat
cgtctgacccgctcgcgcgacgcgctggtggcggacttgcctggtctgacgcgtgaccgt
cactatggcgagggccgcgtcggcgaacgtcctttcctggtcatcgatacaggcggtttc
gagccggtcgccaaggaaggcatcatgttccagatggccctgcagaccaagcaggccgtg
gccgaagcggacgtggtgatcttcctcgtcgacggccgccagggcatgacgccgcacgac
aagaccatcaccgatttcctgcgccgcagcggccgcccggtgctgctggtggtgaacaag
gccgagggcatgaaatacacctcggccgtgtcggacttctacgaactgggcctgggcgat
ccgtatgcgatctccggcgcgcacggcgacggcgtgaccgacctggtctacgaagcactg
gacaaggcgtttgcttcgcgcccggaagatgccgaagagctgctgccgtccgagcgcggc
atcaagctggcgctggtcggccgcccgaacgtgggcaagtccacgctgatcaacacgctg
ctgggcgaagagcgcgtcatcgcgttcgacatgccgggcaccacgcgcgactcgatcgag
atcccgttcgagcgcgacggcaagcactacacgctgatcgatacggccggtatccgccgc
cgcggcaaggtcttcgaggcgatcgagaagttctcggtcgtcaagacgctgcagtcgatc
tcggaagcgaacgtggtcatcctgatgctcgatgcccagcaggacatctccgagcaggat
gcgcacattgccggcttcatcctggagtccggccgcgccctggtgctggccgtgaacaag
tgggatggcctgcagacgcaccagcgcgaccaggtcaagaacgacatggaccgcaagctc
gatttcctcggcttcgccaagacccacttcatctcggcgctgaagggtaccggcatcggc
ccgctgatgaagtccgtcgatgccgcctacggtgcggccatggccgacctgtcgacgccg
aaactgacccgcgcgctgcaggaagccatcgaaaagcaggagccgaagcgtaaaggcggc
ctgcggccgaagttgcgctacgcccaccagggcggcatgaacccgccggtgatcgtcatc
cacggcaactcgctggatgccatcagcgagccttacaagcgctacctggaaaagcatttc
cgcgaaacgttccagctggtcggcacgccgctgcgcattgaattgcgcacgggtaagaat
ccgttcgacaagcgcgagaagagctga
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