Pseudoduganella umbonata: FCL38_12565
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Entry
FCL38_12565 CDS
T06138
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_12565 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_12565 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_12565 (hisS)
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
FCL38_12565 (hisS)
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FCL38_12565 (hisS)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCL38_12565 (hisS)
Prokaryotic type
FCL38_12565 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
Phage_holin_7_1
Motif
Other DBs
NCBI-ProteinID:
QCP11150
UniProt:
A0A4P8HRM1
LinkDB
All DBs
Position
complement(3074623..3075975)
Genome browser
AA seq
450 aa
AA seq
DB search
MSENKKAEKITSVKGMPDILPADAHLWEIFENTAQSILQSYGYQNIRTPIVEETRLFARA
IGAVTDIVEKEMYSFEDSMNGDQLTLRPEGTAGVVRAVLEHNLVYDGPKRLWYKGQMFRH
ERPQRGRYRQFHQFGAEAVGFTGPDIDAELIVLCRRLWDDLGLPDIRLELNSIGDAAERA
AHRVDLIKYLEQHEELLDADAKRRLHTNPLRILDTKNPALQAIVDNAPKLLDYLGEESLK
HFEGVKNILDRNAVQYTVNTRLVRGIDYYNRTVFEWVTDELGAQGTVCAGGRYDPLIEQF
GGKPTPAVGFAMGIERLIELMKSAGETAAPAQCDVYLVHQGAEAQMQAFILGERIRDAGL
DVILHCATAAGAGSFKSQMKKADGSGASFAIIIGEDEVANNTASVKALRGAEGEQQQTAV
AFEEVVGYVVDQIIGGHDCGDDCEDHHHHH
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacaaaaaagcagagaagatcacgtcggtcaaagggatgccggacatcctg
cccgccgatgcccacctgtgggaaatcttcgagaacaccgcgcagtcgatcctgcagagc
tacggctaccagaacatccgcacgccgatcgtcgaggaaacccgcctgttcgcgcgcgcc
atcggcgccgtgaccgatatcgtcgaaaaggaaatgtattcgttcgaagattcgatgaac
ggcgaccagctgacgctgcgcccggaaggcacggccggcgtggtgcgcgccgtgctcgag
cataacctcgtgtacgacggcccgaagcgcctgtggtacaagggccagatgttccgccac
gagcgcccgcagcgcggccgctaccggcagttccaccagttcggcgcggaagccgtgggc
ttcaccggcccggacatcgatgccgagctgatcgtgctgtgccgtcgcctgtgggacgac
ctgggcctgcccgacatccgcctggaactgaattcgatcggcgacgcggccgagcgcgcc
gcgcaccgcgtggacctgatcaagtacctggaacagcacgaggaactgctcgacgcggac
gccaagcgccgcctgcacaccaacccgctgcgcatcctggataccaagaacccggcactg
caggcaatcgtcgacaacgcgccgaaactgctcgactacctgggcgaggaatccctgaag
cacttcgagggcgtgaagaacatcctcgaccgcaacgccgtgcagtacaccgtcaacacg
cgcctggtgcgcggcatcgactactacaaccgcaccgtgttcgaatgggtcaccgacgaa
ctgggcgcgcagggcaccgtgtgcgccggcggccgctacgatccgctgatcgaacagttc
ggcggcaagccgacgccggcggtcggcttcgcgatgggcatcgagcgcctgatcgagctg
atgaaatcggccggcgaaacggcggctccggcccagtgcgacgtgtacctggtgcaccag
ggggcggaagcgcagatgcaggccttcatcctgggcgagcgcatccgcgacgccgggctg
gacgtgatcctgcactgcgccaccgcggccggcgccggttcgttcaagagccagatgaag
aaggccgacggcagcggcgcgtcgttcgccatcatcatcggcgaagacgaagtggccaac
aataccgccagcgtcaaggcgctgcgcggcgccgaaggcgagcagcagcagaccgcggtg
gcattcgaggaagtggtcggctacgtggtcgaccagatcatcggcggccacgactgcggc
gacgactgcgaagatcaccaccaccatcactga
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