Pseudoduganella umbonata: FCL38_12855
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Entry
FCL38_12855 CDS
T06138
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mum
Pseudoduganella umbonata
Pathway
mum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_12855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_12855
Transporters [BR:
mum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FCL38_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCP11206
LinkDB
All DBs
Position
3137486..3139084
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AA seq
532 aa
AA seq
DB search
MRQPADVASRTRRAVLAVPAAAAISALPWHAAGAHDGAHPQGIAAAGKDVLTVVGPWEMT
GLDPSRAGYMFARMEVVETLLDVDDRGRLLAGLATAWGASVDGLQWRFTLRGGRRYHDGS
ALTPASVLACLRRAHARPGVLQLAGIRSMALDANDIVILLHRPFAPLPYLLTHYSTQILA
PASFDARGNVVAIVGSGPFRIASMSLPQQFDVERAAGDADGHAGLRVRKARYISVARSET
RTLLVRSGQADLAFSLDPPSIRALQRSPKAVLMSAMLPRTTFVKLNAGHPFLADVRVRRA
IALCVERDGIARALLRDPGLAATQLFPRSMTAWHDSALPPLRTDPDAARRLLAEAGWHAA
ADGIRRRNGQRLELSLTTFVDRPELPVIAAALQEEMRQVGIAVRVVIGNSSDIPAGHRSG
TLQMGLVARNFGNVPDPVATLLQDFGPDGGDWGAMGWHSADVAGALGRLASTQGDPAGRR
ADRARVAAVLQAELPVIPVVWYRQVCAASRRIAGADIDPYERSYRISRLTWA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagccggctgacgtggcgtcgcgcacgcgccgcgccgtgctcgccgtacccgcg
gccgcggcgatctccgcgctgccgtggcacgccgccggcgcgcacgacggcgcccacccg
caaggcatcgccgccgccggcaaggacgtgctgaccgtggtcggtccgtgggaaatgacc
ggcctcgatccgtcccgcgccggctacatgttcgcccgcatggaagtggtggaaacactg
ctcgacgtcgacgaccgcggccggctgctggccggcctggcaacggcctggggcgcatcc
gtcgacggcctgcagtggcgcttcacgctgcgcggcggccggcgctatcacgacggttcg
gcactcacgccggccagcgtgctggcctgcctgcgccgcgcccatgcccgccccggcgtg
ctgcaactggccggcatccgctctatggcgctcgacgcgaacgacatcgtcatcctgctg
caccggccgttcgccccgctgccctacctgctgacgcactattcgacgcagatcctggcg
ccggcctcgttcgatgcgcgcggcaatgtggtggccatcgtcggcagcgggccgttccgg
atcgcgtcgatgtcgctgccgcagcagttcgacgtggagcgggcggccggagacgcagac
ggccatgccggcctgcgcgtgaggaaagcccgctacatcagcgtggcgcgctcggaaacc
cgcacgctgctggtgagaagcggccaggccgacctggcgttctcgctcgacccgcccagc
atccgcgcgctgcagcgcagcccgaaggcggtgctgatgtcggccatgctgccgcgcacc
accttcgtcaagctcaatgccggccatccgttcctggccgacgtgcgggtacggcgcgcc
atcgcgctgtgcgtggagcgcgatggcatcgccagggcgctgctgcgcgatcccggcctg
gccgccacccagctgttcccccgctcgatgaccgcgtggcacgacagcgcattgccgccg
ctgcgcaccgatccggacgccgcgcggcgcctgcttgccgaagccggctggcatgccgcc
gccgacggcatccgccgccgcaacggccagcgcctcgagctgtcgctgaccacgtttgtc
gaccgccccgagctgcccgtgatcgccgccgcgctgcaggaagagatgcgccaggtcggc
atcgcggtgcgcgtggtgatcggcaattccagcgacattcccgccggccaccgcagcggc
acgctgcagatgggcctcgtggcgcgcaacttcggcaacgtgcccgacccggtggccacg
ctgctgcaggacttcggcccggacggcggcgactggggtgcgatgggctggcacagcgcc
gacgtggccggcgcgctgggccgcctggcatccacgcagggcgacccggccgggcgccgc
gccgaccgcgcccgcgtggcggccgtgctgcaggccgaactgccggtgatcccggtggtg
tggtaccgccaggtgtgcgccgccagccgccgcattgccggcgccgacatcgatccctac
gaacgcagctaccggatatcgcgactgacatgggcatga
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