Pseudoduganella umbonata: FCL38_13095
Help
Entry
FCL38_13095 CDS
T06138
Name
(GenBank) response regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
mum
Pseudoduganella umbonata
Pathway
mum02020
Two-component system
mum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FCL38_13095
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_13095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mum02022
]
FCL38_13095
Two-component system [BR:
mum02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
FCL38_13095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_16
AAA
HTH_8
AAA_2
FleQ
Motif
Other DBs
NCBI-ProteinID:
QCP11246
LinkDB
All DBs
Position
3185942..3187321
Genome browser
AA seq
459 aa
AA seq
DB search
MPAMKPHLLLVDDDDDLLRLLSMRLTANGYRVTAVGSAEAALARLSIELPSLVISDIRLP
DRDGMALFQQIRSQYPALPVILLTAHGTIPDAVEATTLGAYAYLTKPFDAKILLDRISQA
LALTAPSTAGPDGDDSWRAEIISRSQAMAELLAEARLVAASDASVLIRGESGTGKELLAR
AIHRASRRANAPFIAVNCGAIPEQLLESELFGHVKGAYTGAVNSREGLVQAADGGTLFLD
EIGDMPLLLQVKLLRVLQERVVRQLGSDVGRPVDVRVLSATHRDLDAAMLEGQFREDLYY
RLNVITLTLPALAQRREDIGLLATRFLQMLATKYGKTVNGFAPDALEALTRAAWPGNVRQ
LYNVVEHVCALATAPLVPLTLVHRALRVPTLEVLSYTEAKQRFERNYLVQLLKLTDGNVS
DAARLAERNRTEFYRLLSKYDLNAAQFREGGTVAEERQE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatgaaaccccacctgctgctggtcgacgacgacgacgatctgctgcgcctg
ctgtcgatgcggctgacggcgaacggctaccgtgtgacggccgtcggcagcgccgaggcg
gcgctggcccggctgtcgatcgagctgccgtcgctcgtcatcagcgacatccggctgccg
gaccgcgacggcatggcgctgttccagcagatccgcagccagtatccggcactgccggtg
atcctgctgacggcgcacggcacgattcccgacgcggtggaagccaccacgctgggggcc
tatgcctacctgacgaaaccgttcgacgccaagatcctgctggaccggatcagccaggcc
ctggcgctgacggcgcccagcacggcgggtccggacggcgacgacagctggcgcgccgaa
atcatcagccgcagtcaggcgatggccgaactgctggccgaggcgcgcctggtcgcggcg
tccgatgccagtgtgctgatccgcggcgaaagcggcaccggcaaggagttgctggcgcgg
gcgatccaccgcgccagccggcgcgcgaatgcgccgttcatcgccgtcaattgcggcgcg
atcccggagcagctgctggagtcggagctgttcggccacgtgaaaggcgcctacacggga
gccgtcaacagccgcgagggcctggtgcaggcggccgatggcggcacgctgttcctcgac
gagatcggcgacatgccgctgctgctgcaggtaaagctgctgcgcgtgctgcaggaacgc
gtggtgcgccagctgggttccgacgtgggccggccggtcgacgtgcgcgtgttgtcggca
acccaccgcgacctggacgcggccatgctggagggccagttccgcgaggatctgtattac
cggctcaacgtgatcacactgaccttgccggcgctggcgcagcggcgcgaagacatcggc
ctgctcgccacgcgcttcctgcagatgctggcaacgaaatacggcaagaccgtcaacggc
tttgccccggatgcgctggaggcgctgacacgtgccgcctggccgggtaacgtgcggcag
ctgtacaacgtggtcgagcacgtctgcgcgctggccaccgcgccgctcgtgccgctgacg
ctggtgcatcgggcgctgcgcgtgccgacgctggaagtactcagctatacggaagcgaag
cagcgcttcgaacgcaattacctggtacagctgctgaagctcacggatggcaatgtctcc
gatgccgcacggctggccgaacgcaaccgcaccgagttctaccggctgctgtcgaagtac
gacctgaacgcggcccagttccgcgagggcggcactgtcgctgaagagcgacaggaataa
DBGET
integrated database retrieval system