Pseudoduganella umbonata: FCL38_13300
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Entry
FCL38_13300 CDS
T06138
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_13300 (truA)
Enzymes [BR:
mum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FCL38_13300 (truA)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCL38_13300 (truA)
Prokaryotic type
FCL38_13300 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCP11279
UniProt:
A0A4P8HNJ7
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All DBs
Position
complement(3230155..3230979)
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AA seq
274 aa
AA seq
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MKRIALGVQYNGADWQGYQVQPHGQTVQDKLEAAIERFACVRIGTTCAGRTDAGVHALGQ
VVHFDTDLQREPHAWVRGINAFLPDSIGVRWAMPLHEVIPYGDAEFQPELDFHARFSARS
RTYHYLLYNNAVRAPLLSGRAGFSHRPLDVERMRAAVRPLLGRHDFSAFRAAGCQAKTPV
KEMYEIGIERHGDMILFTLRASAFLHHMVRNLVGSLVYVGQGRENTDWLGELLEGRNRTL
AAPTFMPDGLYLAQIEYDSKWGLPQESPRILPAF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcatcgcactgggcgtccagtataacggcgccgattggcagggataccaggtc
cagccgcatggccagaccgtgcaggacaagctcgaggcggcgatcgaacgcttcgcgtgc
gtccgcatcggcaccacctgcgccggccgcacggatgcgggcgtgcatgcgctggggcag
gtggtgcatttcgataccgacctgcagcgcgaaccccatgcgtgggtacgcggcatcaat
gccttcctgcccgattcgatcggcgtgcgctgggccatgccgctgcacgaggtgattccc
tatggcgatgccgaattccagcccgagctcgatttccatgcgcgcttctcggcacgctcg
cgtacctatcattacctgctgtacaacaacgcggtgcgcgcgccgctgctgtccggccgt
gccggcttctcgcaccggccgctggacgtggagcggatgcgcgccgccgtccgcccgctg
ctgggccggcacgacttttcggcgttccgcgccgccggatgccaggccaagaccccggtc
aaggagatgtacgagatcggcatcgagcggcacggcgacatgatcctgttcacgctgcgg
gccagcgcgttcctgcaccacatggtgcgcaacctggtcggttcgctggtctacgtgggg
cagggccgggaaaacaccgactggctgggagaactgctggaagggcgcaaccgcacgctg
gccgcgcccaccttcatgccggacggcctgtacctggcgcagatcgaatacgacagcaag
tggggcctgccgcaggaatccccgcgcatcctccccgccttttaa
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