Pseudoduganella umbonata: FCL38_14505
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Entry
FCL38_14505 CDS
T06138
Name
(GenBank) CysB family HTH-type transcriptional regulator
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mum03000
]
FCL38_14505
Transcription factors [BR:
mum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FCL38_14505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QCP11496
LinkDB
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Position
complement(3510925..3511857)
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AA seq
310 aa
AA seq
DB search
MNFQQLRSIREAARRNYNLTEVANALFTSQPGVSRQIRELEDELGVVIFERNGKRLTGLT
EPGKGILKIIDRLLIEAENLQHASMEYKGQSTGTLTVAATHTQARYALPRAVSHFRTAFP
DVRIALQQSSPEHIAEWVLSGKADIGIATEGLSQFPDLVSFPCYRWSHLIVVPDDHPLLS
RTPVRLEDLAEFQLITYDVGFTGRGHIDDAFDKAGVRPDIVLTAMDSDVIKQYVSLGLGV
GIVASMAFDHGRDKGLRAIEASHLFASNTTRLAVRRGAYLRQYAYEFIAQFAPELKRGDI
EQALLGGEAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccagcagttgcgttccatccgcgaggcggcccgccgcaactacaacctgacc
gaagtggccaatgcgctgttcacgtcgcagccgggcgtgagccggcagatccgcgaactc
gaggacgaactgggcgtcgtcatcttcgagcgcaacggcaagcggctgacgggcctgacc
gagccgggcaagggcatcctgaagatcatcgaccgcctgctgatcgaggcggaaaacctg
cagcatgccagcatggagtacaagggccagagcaccggcacgctgacggtggccgccacg
cacacgcaggcgcgctatgcgctgccgcgcgccgtgtcgcacttccgcaccgcgttcccg
gacgtgcggatcgcgctgcagcagagctcacccgaacacatcgccgagtgggtattgtcc
ggcaaggccgatatcggtatcgctaccgagggcctgtcgcagttccccgatctggtgtct
ttcccgtgctaccgctggagccacctgatcgtggtgccggacgaccatccgctgctgagc
cgcacaccggtacggctggaggacctggccgagttccagctgatcacgtacgacgtgggc
ttcacgggccgtggccacatcgatgatgcgttcgacaaggccggcgtgcggcccgatatc
gtgctgaccgcgatggattcggacgtgatcaagcagtacgtgtcgctcggcctcggtgtc
ggcatcgtcgcgtcgatggcgttcgaccatggccgcgacaagggcctgcgtgccatcgag
gcatcgcacctgttcgcatcgaacaccacgcggctggccgtgcggcgcggcgcctacctg
cggcagtatgcgtatgaattcatcgcgcagttcgcgccggagctgaagcggggcgatatc
gagcaggcgctgctggggggcgaggcggcatga
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