Pseudoduganella umbonata: FCL38_15485
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Entry
FCL38_15485 CDS
T06138
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00540
Lipopolysaccharide biosynthesis
mum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FCL38_15485
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mum01005
]
FCL38_15485
Enzymes [BR:
mum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
FCL38_15485
Lipopolysaccharide biosynthesis proteins [BR:
mum01005
]
Core region
FCL38_15485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF5924
Motif
Other DBs
NCBI-ProteinID:
QCP11664
LinkDB
All DBs
Position
complement(3744080..3745354)
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AA seq
424 aa
AA seq
DB search
MNKNIARQADDVTPVAAVSTVAAITVNCLVFLLPFLTLITNAGVGLCSFGFLLAAIWCHR
QGLPEFRRHLNDIRGVLTAFAAACLFAGLTVLLHAEVYLRNFEKPSRMLLAATAIMAVLA
CRPSRMALWWGLIGGAVGGACLAGYQRWVLHIDRPGGLMNAITFGDIVLCMGLMCLAAVL
DFRGRQRLWPALGVVAGLIGTLATGTRGGWVAIVFAALLFLKYGHYLRGRFAKGAAALVA
VLMIGAYFVPQSGMSERLEQGVSDVQTYFSGGSAFTNVGVRLELWKGAVLLAARDPWMPN
SQEQVKAELGELVAAGTLQPFVLEAEHFHNDALQALVFGGVLGLMCWFGTLLLPFLFFLR
MLHSHESAPPALVSAALAGLLLVLSYFSFGLTEVIFWSMRSAMFYALMLFMLVGLCLNAR
EGKQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatattgcaaggcaagccgacgacgttacacctgtagccgctgtttccact
gttgccgccattaccgtcaattgcctggtcttcctcctgcccttcctgaccctgatcacc
aatgccggcgttggcctgtgcagcttcgggttcctgctggcggcgatctggtgccacagg
cagggcctgccggagttccggcgtcatcttaacgacatccgcggcgttttgacagctttc
gccgcagcctgcctgtttgccggcctgaccgtgctgctgcacgccgaggtctacctgcgc
aacttcgagaagcccagccgcatgctgcttgccgccaccgcgattatggccgtgctcgct
tgccggccgagccgcatggccttgtggtggggcctgatcggcggcgccgtcggcggcgcc
tgcctggccggctaccagcgctgggtcctccacatcgaccggcccggcggcttgatgaat
gcgatcacgttcggcgacatcgtgctgtgcatgggcctgatgtgcctggccgcggtactg
gatttccgcggccggcaacgcctctggcccgcgcttggcgtggtggccggcctgatcggt
acgcttgccaccggcacgcgcggcggctgggtggccatcgtgttcgcggcactgctgttc
ctcaagtatggccactacctgcgcggccggttcgccaagggcgccgccgcgctggtggcg
gtgctgatgatcggcgcctatttcgtgccccagagcggcatgagcgaacggctggagcag
ggcgtcagcgacgtgcaaacgtatttcagcggcggcagcgcgttcaccaacgtgggcgtg
cggctggaattgtggaagggcgccgtgctgctggccgcgcgcgatccgtggatgccgaac
agccaggaacaggtgaaagccgaactcggcgaactggtggccgccggcacgctgcagccg
ttcgtgctggaggccgagcattttcacaacgatgcattgcaggccctcgtgttcggcggc
gtgctgggcctgatgtgctggttcggcacgctgctgctgccgttcctgttcttcctgcgc
atgctgcactcgcatgaatcggcaccgcccgcactggtgtcggcggcgctggccggactg
cttctggtgctgagctacttcagtttcggcctgacggaagtgatcttctggtccatgcgc
agcgcgatgttctatgcgctgatgctgttcatgctggtgggcctgtgcctgaatgcccgt
gaaggaaagcagtga
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