Pseudoduganella umbonata: FCL38_16510
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Entry
FCL38_16510 CDS
T06138
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCL38_16510
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mum01007
]
FCL38_16510
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_16510
Enzymes [BR:
mum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
FCL38_16510
Amino acid related enzymes [BR:
mum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FCL38_16510
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FCL38_16510
Prokaryotic type
FCL38_16510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
QCP11843
LinkDB
All DBs
Position
complement(3980927..3982663)
Genome browser
AA seq
578 aa
AA seq
DB search
MRASRFFISTLKEAPSDAEIVSHKLMMRAGMIKRLGSGIYTYMPMGLKVIRKVEAIVREE
MNRAGAIELLMPLVQPAELWQETGRWDKMGPELMRVKDRHGREFAIQPTSEEVITDVVRS
EIKSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSFDRDLEGMQKSYQVMFDA
YTKIFTRFGLKFRAVAADNGAIGGTGSHEFHVIASTGEDALVYCPTSDYAANMEAAEAVA
SGTRAAPSAELVKTATPKAAKCEDVAKLLGIDLSKTVKTIALTAETEKDGKLDKQYFMLL
LRGDHELNEIKAAKVPGLQGAYRFSTEQEILEVYGCKPGYLGPIGTKAPVTIVADRTVAN
MADFVTGANEEDFHFTGANWGRDVAEPHVTADLRNVVEGDPSPDGKGVLAIERGIEVGHV
FQLGTAYSAAMNATYLDENGKPAPLQMGCYGIGVTRILGAAIEQNFDDKGIIWPTSIAPF
ELVLCPMGYDRSELVKEETDKLYAAALAAGIDVIVDDRGLRPGAMFADWELIGVPHRVVI
GDRGLKDGNLEYQGRRDTEATNVPLADIVAFIKARVQQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgtcacggttttttatttccacacttaaagaggctccttcggacgccgaaatc
gtcagccacaaactgatgatgcgggccggcatgatcaagcgcctgggctcgggcatctac
acgtacatgccgatgggcctgaaggtgatccgcaaggtcgaagcgatcgtgcgcgaggag
atgaaccgcgccggcgccatcgagctgctgatgccgctggtccagccggccgagctgtgg
caggaaacgggccgctgggacaagatggggccggaactgatgcgcgtaaaggaccggcat
ggccgcgagttcgcgatccagccgacctccgaggaagtgatcaccgatgtcgtgcgtagc
gagatcaagtcgtaccgccagctgcctttgaatttttaccacatccagaccaagttccgc
gacgagcgccgtccccgtttcggcctgatgcgcggccgtgaattcacgatgaaggatgcg
tactcgttcgaccgcgacctggaaggcatgcaaaagtcctatcaggtgatgttcgatgcg
tacaccaagatcttcacgcgcttcggcctgaagttccgcgccgtggcggccgacaacggc
gccatcggcggcaccggttcgcacgagttccacgtgatcgccagcaccggcgaagatgcg
ctggtgtattgccccacctccgactacgcggccaatatggaagcggccgaggcggtggcg
tcgggcacgcgcgccgcgccgtccgccgaactggtcaagactgccacgccgaaggccgcc
aagtgcgaggacgtcgcgaaactgctggggatcgacctgtcgaagacggtgaagacgatc
gcgctgacggccgagacggagaaggacggcaaactggataaacagtatttcatgctgctg
ctgcgcggcgaccatgaactgaacgagatcaaggccgcgaaggtaccgggcctgcagggc
gcttaccgcttctcgaccgaacaggaaatcctcgaagtgtacggctgcaagccgggctac
ctggggccgatcggcacgaaggcgccggttaccatcgtggccgaccgcaccgtggccaac
atggccgacttcgtcaccggcgccaacgaggaagacttccacttcaccggcgccaactgg
ggccgcgacgtggccgagccgcacgtgacggccgacctgcgcaacgtggtcgaaggcgat
ccttcgccggacggcaagggcgtactggcgatcgagcgcggcatcgaggtgggccacgtg
ttccagctggggaccgcgtactcggccgcaatgaacgccacctacctggacgagaacggc
aagccggcgccgctgcagatgggctgctacggtatcggtgtcacgcgtatcctgggtgcg
gcgatcgagcagaacttcgacgacaagggcatcatctggccgacctcgatcgcgccgttc
gagctggtgctgtgcccgatgggttacgaccgcagcgagctggtgaaggaagagaccgac
aagctgtacgcggcggcgctggcggccggcatcgacgtgatcgtcgacgaccgcggcctg
cgcccgggcgcgatgttcgccgactgggaactgatcggcgtgccgcaccgcgtggtgatc
ggcgaccgtggcctgaaggacggcaacctggaataccagggccgccgcgataccgaagcg
accaacgtgccgctggcggacatcgtggccttcatcaaggcccgagtgcagcagtaa
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