Pseudoduganella umbonata: FCL38_16515
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Entry
FCL38_16515 CDS
T06138
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCL38_16515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mum03019
]
FCL38_16515
Messenger RNA biogenesis [BR:
mum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FCL38_16515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
GAIN_A
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QCP11844
UniProt:
A0A4P8HTL8
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All DBs
Position
3982895..3983524
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AA seq
209 aa
AA seq
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MLDREGFRPNVGIILLNSHNEVWWGKRVREHSWQFPQGGIKYGETPEQAMYRELQEEIGL
KPEHVKIVGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMCARDNEVNLRLTDHPE
FDAWRWHEYWVPLDVVIEFKREVYQRALQELSRFLTWPAHGERRHSSRYLRQPHGRGQQG
QRPQHQNVAAPPQELVGCDGAALAGSAKR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgggaagggttccgccccaacgtcggcatcatcctgctcaactcgcataac
gaggtgtggtggggcaagcgggtgcgcgagcactcatggcaatttccgcaaggaggaatc
aagtacggcgaaacacccgaacaggccatgtaccgggagttgcaggaagaaatcggcctg
aagccggaacacgtgaaaatcgtgggccgcacgcgcgactggctgcgctacgaggtgccg
gaccatttcatcaagcgcgagatccgcggccattaccgtggccagaagcagatctggttc
ttgctgcgcatgtgcgcgcgcgacaatgaagtgaacctgcgcctgacggatcatcccgag
ttcgacgcctggcgctggcacgaatactgggtgccgttggacgtggtcatcgaattcaag
cgcgaggtgtaccagcgcgcgctgcaggagctgtcgcgcttcctgacctggcccgcgcac
ggcgaacgccgtcattcatcgcgctacctgcgccagccgcacggccgcggccagcaaggg
cagcggccgcagcatcagaacgttgcggcgccaccgcaggaactggtcggctgcgacggc
gcggcgctggccggttccgccaagcgctga
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