Pseudoduganella umbonata: FCL38_17160
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Entry
FCL38_17160 CDS
T06138
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
mum
Pseudoduganella umbonata
Module
mum_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mum02000
]
FCL38_17160
01504 Antimicrobial resistance genes [BR:
mum01504
]
FCL38_17160
Transporters [BR:
mum02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FCL38_17160
Antimicrobial resistance genes [BR:
mum01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
FCL38_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QCP11951
LinkDB
All DBs
Position
complement(4134441..4135664)
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AA seq
407 aa
AA seq
DB search
MNSQQRGRPGLKKMLGALAAAGMCAAAVSGCTDANSKTEPPAASAGPPVSAAVVVERPVA
ETQEFSGRLEAIEVVQIRPRVSGYITAVNFTPGAEVKKGTLLFVIDPRPYQAEADRAQAA
ANSARARADLARIELQRAERLLADKAIAQREFDERAAGQKELEANARAAQAQLDAARLNL
SYTRVTAPIDGRISKAEITLGNLVDATAVLTSVVSLDRMYASFDGDEQTYLRVGSRAQRG
QPTVVKVGLNNEDGYPHEGVLEFVDNQLDTQTGSVRMRATLNNADRVLAPGLFARIQVGS
GVAQNAILIRDKAVGTDQSRKFVVVVGPDNKTAVRQVTLGPLADGMRVVRSGLKPGEKII
VDGLQRVTPGAAVSAQLVPMDEAAARAAKLAGASRDMPLASANGNEE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccaacaacggggcaggccgggcctgaaaaagatgctgggtgcgctggcagcg
gccggcatgtgcgcggcagccgtttcaggatgcacggacgcgaacagcaagaccgagccg
cctgccgcgagtgcaggtccgcccgtgtcggcggccgttgtcgtcgagcggccggtcgcg
gaaacccaggagttctcgggacgcctggaggcgatcgaggtggtgcagatccggccgcgc
gtcagcggctacattaccgcggtcaacttcacgccgggcgcggaagtgaagaagggcacc
ctgctgttcgtgatcgatccgcgcccttaccaggcggaagccgaccgtgcgcaggccgcg
gcgaactccgcccgtgcgcgcgccgacctggcccgcatcgagctgcaacgcgcggagcgg
ctgctggcggacaaggcgatcgcgcagcgcgagttcgacgaacgggccgccggtcaaaag
gagctcgaagcgaacgcccgcgcggcgcaggcgcagctcgacgctgccaggctgaacctg
tcctacacgcgggtgaccgcaccgatcgacgggcgcatttcgaaagcggaaatcacgctg
ggcaacctggtcgatgccactgcggtgctgacgtcggtcgtgtccctcgaccgcatgtat
gccagtttcgacggcgatgaacagacctacctgcgcgtcggctcgcgtgcgcaacgggga
cagccgacggtcgtcaaggtaggactgaacaacgaggacggctacccgcacgaaggcgta
ctcgaattcgtcgacaaccagctcgacacgcagaccggcagcgtgcgcatgcgtgcaacg
ctgaacaacgcggaccgggtgctggctcctgggctgtttgcccgcatccaggtcggcagc
ggtgtcgcgcagaacgcgatcctcatcagggacaaggccgtcggtacggaccagagccgc
aagttcgtcgtcgtcgtcggcccggacaacaagactgccgttcgccaggtcacgctgggc
cctctggcagacggcatgcgcgtggtgcgcagcggcctgaagcccggcgagaaaattatc
gtcgacggcctccagcgggtaactcctggcgctgctgtttcggcgcagctcgtgcccatg
gacgaagccgcagcccgcgccgcgaaactagccggcgcgagccgggatatgccgctggcc
tccgcaaacggaaacgaggaataa
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