Pseudoduganella umbonata: FCL38_17760
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Entry
FCL38_17760 CDS
T06138
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCL38_17760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mum03400
]
FCL38_17760
Enzymes [BR:
mum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FCL38_17760
DNA repair and recombination proteins [BR:
mum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCL38_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4130
Motif
Other DBs
NCBI-ProteinID:
QCP14778
LinkDB
All DBs
Position
complement(4264374..4265903)
Genome browser
AA seq
509 aa
AA seq
DB search
MLNDSGSKVVDEVEVRSEAATEVASEAATVVASEAATVVASEAATVVAATEASSKAVTES
ASESASKLASEETHNPDERSDPPPTNSSPGAQPRISRKLMEMLQGAACYRAHDRWAFLYR
VLWRWNDGEHEVISMADEDGARLHHMVRSVRHEEHDMHAYLRFRERPEEAGAPRFVAWFE
PAHDVLPQVAQHFAKRMGKTSWMIATPEATVLWDGATLHTGEALARSAADFDDAGEALWL
TYYRSIFNPARLNADIMHGHIRQRFWKNLPEAAVVPHMVTQAAAGARKVGQLDTVGKRGG
TTIPIAPDKAAPERQQPSSLDECRRCDLWQNATQAVAGQGARRAKIMLVGEQPGDQEDLA
GKPFVGPAGDLLDKAMDAAGLDRRTVYVTNAVKHFKWEPRGKRRLHKTPAQKEVMACHYW
LEAELETVAPQVLVALGSTALKSILQTGSVTMKDYMGAPFEHEGRWVVVTYHPAYALRVP
DRESRQAAFAAIVEALKTAQQIAGGASQG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgactcgggtagcaaggtagtagatgaagttgaagtacgcagcgaagcagca
actgaagtagcaagtgaagcagcaactgtagtagcaagtgaagcagcaactgtagtagca
agtgaagcagcaactgtagtagcagcaactgaagcaagcagcaaggcagtaaccgagtcg
gcaagtgaatcagcaagtaagttggccagtgaggaaactcataaccccgatgaacgatcg
gacccgccgcccacgaactcttcaccaggcgcgcagccgcgtatctcccgcaagctgatg
gagatgctgcaaggcgccgcctgctatcgcgcccacgaccgctgggccttcctgtaccgc
gtgctgtggcgctggaacgatggcgaacacgaggtcatatcgatggcggatgaagacggc
gcgcgcctccaccacatggtgcggtcggtgcggcacgaagaacacgacatgcatgcctac
ctgcgctttcgcgagcgtcccgaagaggcgggcgcgccgcgcttcgttgcgtggttcgag
ccggcacatgacgtattgccgcaagtcgcgcagcacttcgcaaagcgcatgggcaagacc
agctggatgatcgccacgcccgaagccaccgtgctgtgggacggtgccacgctgcacacc
ggcgaggcgctggcacgcagcgcggcggacttcgacgatgccggcgaagcgctgtggctc
acctactatcgcagcatcttcaatcccgcccgcctcaacgcggacatcatgcacggccat
atccggcagcggttctggaagaacctgccggaagcggccgtggtgccgcacatggtcacg
caggccgcggctggtgcccgcaaggtggggcagctcgataccgtcggcaagcgcggcggc
accacgatccccatcgcccccgacaaggccgcgcccgagcgccagcaacccagttcgctg
gacgaatgccgccgctgcgacctgtggcagaacgctacgcaggcggtggcggggcagggc
gcgcgccgcgcaaaaatcatgctggtgggcgagcagccgggcgaccaggaagacctggcc
ggcaagcccttcgtcggcccggccggcgatctgctggacaaggcgatggatgcagcgggc
ctggaccgccgcaccgtgtatgtcaccaacgccgtcaagcacttcaagtgggagccgcgc
ggcaagcggcgcctgcacaagacgcccgcgcagaaggaagtgatggcctgccactactgg
ctcgaggcggaactggaaacggtcgcgccgcaggtgctggtggcgctgggcagcaccgca
ttgaagtcgatcctgcagaccggcagcgtaacgatgaaggactacatgggcgcgccgttc
gagcacgaagggcgctgggtcgtcgtcacctaccatccggcctatgcgctgcgggtgccc
gaccgggaatcgcggcaggcggcgttcgcggcgatcgtcgaggcgctgaaaacggcgcag
cagatcgcgggcggcgcgtcccagggctga
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