Pseudoduganella umbonata: FCL38_18480
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Entry
FCL38_18480 CDS
T06138
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mum03000
]
FCL38_18480
Transcription factors [BR:
mum03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FCL38_18480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Crp_2
Crp
Motif
Other DBs
NCBI-ProteinID:
QCP12189
LinkDB
All DBs
Position
complement(4437261..4438202)
Genome browser
AA seq
313 aa
AA seq
DB search
MSFANLARLGRERPLRMLLVNAGDAESLTWSGLVQPLRLAQRLLGDAFLLDIRTPAAVAA
TGADGWHVALLVADEQQPPLPPQLLYAVLDRCRTATSWGGVGAAVLWLAAAGHAAGVRIA
LPWALYGDTGEVAEQAILTPHLFECDGRHITCCGGAASIDFALTLIEHLLGSGTGAAVKE
ALCIDRVRTADERQRVALQARFGVLQPKLSEAVTLMEANIEEPLSTDDIANLVGLSRRQL
ERLFKQYLGSLPSRYYLELRLQRARQLLRETNHSIVQVGLMCGFSSGSHFSTAFGTLFGN
TPREERQRKLAAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgctaacctcgcacggctcggccgcgagcggccgctgcgcatgctgctcgtg
aatgccggcgatgccgagagcctcacctggtccggcctggtccagccgctgcggctggcg
cagcgcctgctgggcgatgccttcctgctcgacatccgcacgccggccgccgtggcggcc
accggtgccgatggctggcacgtggcgctgctggtcgcggacgagcagcagcccccattg
ccgccgcaactgctgtacgcggtgctcgaccgttgccgcaccgccaccagttggggcggc
gtcggcgccgccgtgctgtggctggccgcggcgggacatgccgccggggtgcgcatcgcg
ctgccctgggccctgtacggcgataccggggaagtcgccgagcaggcgatcctgacaccg
cacctgttcgaatgcgatggccggcacatcacctgctgcggcggcgcggccagcatcgat
ttcgcgctgaccctgatcgagcacctgctcggcagcggcaccggcgccgccgtcaaggag
gcgctgtgcatcgaccgcgtgcgcactgccgacgaacgccagcgcgtggccttgcaggcc
cgcttcggcgtgctgcagccgaagctgtccgaagcggtgacgctgatggaagcgaacatc
gaggagccgctgtccaccgacgacatcgccaacctggtcggcctgtcgcgccgccagctc
gagcgcctgttcaagcaatacctgggcagcctgccgtcgcgctactacctggaactgcgg
ctgcagcgcgcccgccagctgctgcgggaaaccaaccactcgatcgtgcaggtggggctg
atgtgcggcttctcgtccggctcgcacttttccaccgcattcggcacgctgttcggcaac
accccccgcgaagaacgccaacgcaaactcgccgccgcctga
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