Pseudoduganella umbonata: FCL38_18665
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Entry
FCL38_18665 CDS
T06138
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00061
Fatty acid biosynthesis
mum00071
Fatty acid degradation
mum01100
Metabolic pathways
mum01212
Fatty acid metabolism
mum02024
Quorum sensing
mum04146
Peroxisome
Module
mum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FCL38_18665
00071 Fatty acid degradation
FCL38_18665
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FCL38_18665
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCL38_18665
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mum01004
]
FCL38_18665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mum04147
]
FCL38_18665
Enzymes [BR:
mum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FCL38_18665
Lipid biosynthesis proteins [BR:
mum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FCL38_18665
Exosome [BR:
mum04147
]
Exosomal proteins
Exosomal proteins of breast milk
FCL38_18665
Exosomal proteins of breast cancer cells
FCL38_18665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
Motif
Other DBs
NCBI-ProteinID:
QCP12222
LinkDB
All DBs
Position
complement(4480177..4481874)
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AA seq
565 aa
AA seq
DB search
MDKIWLKSYPSGVPAEIDPNQYRSLVHLLEESFQKYADRKAFVCMDKFITFGELDTYSKR
LGAWLQSRGMKPGARVALMMPNVLQYPVALAAVLRAGYTVVNVNPLYTPRELEHQLADSG
AEAIVILENFAHTLEQVITRTAVKHIIVASMGEMLGMAKGLVVDFVVRNVKKMVPAYSLP
NAVRFKEALSHASAMKLTPVEITHDDVAFLQYTGGTTGVSKGATLTHRNVIANVLQVEAW
SQPGLVKEPRVEEPSIVCALPLYHIFALTACAMWGMRMGALNILIPNPRDIGGFIKELAK
YKFNMLPAVNTLYNALVNHPDFHHLDFSGLKIANGGGMAVQQAVNDKWLKATGVAIIEGY
GLSETAPVATCNRADSTAFSGTIGLPVPSTEVTILDDDGNEVPLGQPGEIAIRGPQVMAG
YWNRPEETAKVMTADGYFKSGDVGVMDDRGYVKIVDRKKDMILVSGFNVYPNELEAVVSA
HPGVLEVACIGVPDAHSGEAVKLYVVRKDPTLTVDALMAYCKENLTGYKKPKYIEFRDEL
PKTNVGKILRRVLRDEVTAGTQEAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatctggttgaagtcgtacccatccggcgttcctgccgagatcgatccgaac
cagtaccgcagcctggtacatctgctggaagagtcattccagaaatacgcggaccgcaag
gcattcgtatgcatggacaagttcatcaccttcggtgaactcgatacctattcgaaacgc
ctcggcgcctggctgcagagccgcggcatgaagccgggtgcgcgcgtggcgctgatgatg
ccgaacgtgctgcaatatccggtcgcgctggccgccgtgctgcgtgccggctacaccgtg
gtcaacgtcaatccgctgtacacgccgcgcgagctggagcaccagctggccgattcgggc
gccgaagcgatcgtcatcctggaaaacttcgcccatacgctcgagcaggtgattacccgc
acggccgtgaagcacatcatcgtcgccagcatgggcgagatgctgggcatggccaagggc
ctggtggtcgacttcgtcgtgcgcaacgtgaagaagatggtgccggcgtattcgctgccg
aacgcggtgcgcttcaaggaggcgctgtcgcatgcgtcggccatgaagctcacgccggtg
gaaatcacccatgacgacgtggccttcctgcagtacaccggcggcaccacgggcgtctcg
aaaggcgccacgctgacacacaggaacgtgatcgccaacgtgctgcaggtggaagcctgg
tcgcaaccgggcctggtcaaggagccgcgcgtcgaggagccgtcgatcgtctgcgcgctg
ccgctgtatcacatcttcgcgctgacggcctgcgcgatgtggggcatgcgcatgggggcg
ctgaacatccttattcccaatccgcgcgacatcggcggcttcatcaaggaactggcgaaa
tacaagttcaacatgctgccggccgtgaacacgctgtacaacgcgctggtgaaccatccc
gatttccaccacctcgatttttccggcctgaagatcgccaacggcggcggcatggcggta
cagcaggccgtcaacgacaagtggctgaaggcgacaggcgtggcgatcatcgaaggctat
ggcctgtcggaaacggcgccggtggccacctgcaaccgcgccgacagtaccgcgttttcc
ggcacgatcggcctgccggtcccgtcgaccgaggtgacgatcctggatgacgacggcaac
gaagtcccgctgggccagcccggcgagatcgccatccgcggcccgcaggtgatggccggc
tactggaaccggccggaagaaacggccaaggtgatgacggccgacggctatttcaaatcg
ggcgacgtgggcgtgatggacgatcgcggctatgtgaagatcgtcgaccgcaagaaggac
atgatccttgtctccggcttcaatgtctatccgaacgagctcgaagcggtggtatccgcg
cacccgggcgtgctcgaagtggcctgcatcggcgtgcctgacgcgcattccggagaggcg
gtcaagctgtacgtagtgcgcaaggacccgacgctgaccgtcgatgccttgatggcctac
tgcaaggaaaacctgaccggctacaagaagccgaaatacatcgagttccgcgacgaactc
cccaaaaccaatgtcggcaagatcctgcggcgtgtattgcgagacgaagtcacggccggc
acccaggaagctgcatga
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