Pseudoduganella umbonata: FCL38_18835
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Entry
FCL38_18835 CDS
T06138
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
mum
Pseudoduganella umbonata
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mum03016
]
FCL38_18835 (mnmE)
Transfer RNA biogenesis [BR:
mum03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FCL38_18835 (mnmE)
Prokaryotic type
Methyltransferases
FCL38_18835 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
MCM
Roc
Arf
AAA_16
ABC_tran
AAA_29
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
QCP12243
LinkDB
All DBs
Position
complement(4519468..4520847)
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AA seq
459 aa
AA seq
DB search
MNLDTLPIAAIATAPGRGGIGVVRASGKNLRPLAQALFGGAELKPRHATYIPFTQADGTL
IDQGIAIYFKGPHSYTGEDVLELQGHGGPVVLQMLLQRVLEAGRDVGLRLAEPGEFTRRA
YMNDKLDLAQAEAVADLIDASTEAAAKSASQSLSGAFSQAIHALVDRVTHLRMLVEATLD
FPEEEIDFLEKSDARGQLRGIVEALDHVFRQASQGALLREGLNVVLVGQPNVGKSSLLNA
LAGADVAIVTPIAGTTRDKVTETIQIEGIPLNIIDTAGIRGHDEAVDVVERIGIERTWGE
VGKADVILHMLDANHGPTRADESILAGFPAGVPVLRIWNKIDLSGHKASIDASNDATHIY
LSAHDHAGIDLLRKELLRIAGWQQTGESLYLARERHLVALKSAARHLDHAEGHAAQTDQS
LDLFAEELRLAQVQLATITGAFSSDDLLGVIFSRFCIGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgataccctccccattgccgcgatcgccaccgccccgggccgcggcggcatc
ggcgtcgtgcgcgcgtccggcaagaacctgcggccgctggcgcaggcgctgttcggtggc
gcggaactgaagccgcgccacgctacctatattccgttcacccaggcggacggcacgctg
atcgaccagggcatcgcgatctatttcaagggaccgcactcgtacacgggcgaggacgtg
ctggaactacagggccatggcggccccgtggtgctgcagatgctgctgcagcgcgtgctc
gaggcaggccgcgatgtcggcctgcggcttgccgagccgggcgagttcacgcgccgcgcc
tacatgaacgacaagctcgatctggcacaggccgaggcggtggccgacctgatcgacgcg
tccaccgaagcggcggcgaagtccgcctcgcaatcgctgtccggcgcattttcgcaggcc
atccacgcgctggtcgaccgcgtcacgcacttgcgcatgctggtcgaagccacgcttgat
ttcccggaagaggaaatcgacttcctggaaaagtccgacgcgcgcggccagctgcgcggc
atcgtcgaagcgctggatcacgtcttccgccaggcttcccagggggcgctgctgcgcgaa
ggcctgaacgtggtactggtggggcaacccaacgtaggtaagtcctcacttctcaacgcg
ctggccggggcggacgtggccatcgtcacgccgatcgccggcaccacgcgcgacaaggtc
accgaaacgatccagatcgaaggcatcccgctgaacatcatcgacacggccggtatccgc
ggccacgacgaagcggtggatgtcgtcgaacgtatcggcatcgagcgcacctggggcgaa
gtgggcaaggcggacgtgatcctgcacatgctcgacgcgaaccatggtccgacccgcgcc
gacgaatccatcctggccggcttcccggcaggcgtgccggttctgcgcatctggaacaag
atcgatctttccggccacaaggcgtcgatcgacgcgagcaacgatgccacgcatatctac
ctgtcggcgcacgatcatgccggcatcgacctgctgcgcaaggaactgctgcgcatcgcc
ggctggcagcagaccggcgaatcgctctatctggcccgcgagcggcacctggtcgcgttg
aaatcggccgcgcggcacctggaccatgccgaaggccatgccgcgcagaccgaccagtcg
ctcgacctgttcgccgaggaactgcgcctggcgcaggtgcagctggccacgatcaccggg
gcgttttcgtcggacgacctgctgggcgtgattttcagccggttctgtatcggcaaataa
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